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Protein Overview: gi|13430830, gi|...

General Information:
Name(s) found: gi|18424719 [NCBI NR]
gi|15810597 [NCBI NR]
gi|13430830 [NCBI NR]
Description(s) found:
Found 10 descriptions.
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  • gi|18424719|ref|NP_568974.1| ATFP3; metal ion binding / transition metal ion binding [Arabidopsis thaliana] [NCBI NR]
  • gi|15810597|gb|AAL07186.1| unknown protein [Arabidopsis thaliana] [NCBI NR]
  • gi|13430830|gb|AAK26037.1|AF360327_1 unknown protein [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 355 amino acids

    Gene Ontology:
    Cellular Component: plasma membrane [IDA]
    Biological Process: cellular transition metal ion homeostasis [TAS]
    Molecular Function: transition metal ion binding [IDA]
    metal ion binding [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGEEEKKPEA AEEKKMEEKK PEEKKEGEDK KVDAEKKGED SDKKPQEGES NKDSKEDSAP  60
   61 AAPEAPAPPP PPQEVVLKVY MHCEGCARKV RRCLKGFEGV EDVMTDCKTG KVVVKGEKAD 120
  121 PLKVLARVQR KTHRQVQLLS PIPPPPPPPE KKAEEDKPIV EEKKVEPPVV VTVVLKVHMH 180
  181 CEACATEIKK RIMRMKGVES AESDLKSSQV TVKGVFEPQK LVEYVYKRTG KHAAIMKIDP 240
  241 PPPPPPEEAA AAAEGEKKEE EKGEGESKGE EGKDDKAKTD EEKKEGDGGK GEGEAADNGG 300
  301 GEEEGKVVEV RKIENPYYYY YYQPPRVAIP PMEMPPHAYP PQLFSDENPN ACTVM

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..71] PSI-BLAST 23.045757 Structure characterization of the water soluble region of P-type ATPase CopA from Bacillus subtilis
    2 View Details [72..244] PSI-BLAST 20.221849 No description for 2ew9A was found.
    3 View Details [245..355] PSI-BLAST 6.522879 Copper chaperone for superoxide dismutase, C-terminal domain; Copper chaperone for superoxide dismutase, N-terminal domain

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  0.246147507070597 bayes_pls_golite062009
    2 No functions predicted.
    3 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle