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Protein Overview: HGL2_ARATH

General Information:
Name(s) found: HGL2_ARATH [Swiss-Prot]
Description(s) found:
Found 16 descriptions.
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  • Homeobox-leucine zipper protein GLABRA 2 OS=Arabidopsis thaliana GN=GL2 PE=2 SV=3 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 747 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDA][ISS]
    Biological Process: epidermal cell fate specification [IMP]
    negative regulation of trichoblast fate specification [IMP]
    regulation of transcription, DNA-dependent [ISS]
    Molecular Function: DNA binding [ISS]
    transcription factor activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSMAVDMSSK QPTKDFFSSP ALSLSLAGIF RNASSGSTNP EEDFLGRRVV DDEDRTVEMS  60
   61 SENSGPTRSR SEEDLEGEDH DDEEEEEEDG AAGNKGTNKR KRKKYHRHTT DQIRHMEALF 120
  121 KETPHPDEKQ RQQLSKQLGL APRQVKFWFQ NRRTQIKAIQ ERHENSLLKA ELEKLREENK 180
  181 AMRESFSKAN SSCPNCGGGP DDLHLENSKL KAELDKLRAA LGRTPYPLQA SCSDDQEHRL 240
  241 GSLDFYTGVF ALEKSRIAEI SNRATLELQK MATSGEPMWL RSVETGREIL NYDEYLKEFP 300
  301 QAQASSFPGR KTIEASRDAG IVFMDAHKLA QSFMDVGQWK ETFACLISKA ATVDVIRQGE 360
  361 GPSRIDGAIQ LMFGEMQLLT PVVPTREVYF VRSCRQLSPE KWAIVDVSVS VEDSNTEKEA 420
  421 SLLKCRKLPS GCIIEDTSNG HSKVTWVEHL DVSASTVQPL FRSLVNTGLA FGARHWVATL 480
  481 QLHCERLVFF MATNVPTKDS LGVTTLAGRK SVLKMAQRMT QSFYRAIAAS SYHQWTKITT 540
  541 KTGQDMRVSS RKNLHDPGEP TGVIVCASSS LWLPVSPALL FDFFRDEARR HEWDALSNGA 600
  601 HVQSIANLSK GQDRGNSVAI QTVKSREKSI WVLQDSSTNS YESVVVYAPV DINTTQLVLA 660
  661 GHDPSNIQIL PSGFSIIPDG VESRPLVITS TQDDRNSQGG SLLTLALQTL INPSPAAKLN 720
  721 MESVESVTNL VSVTLHNIKR SLQIEDC

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..84] FFAS03 1.08 Ribosomal protein L10
    2 View Details [85..175] PSI-BLAST 18.69897 Solution structure of the homeobox domain of the human paired box protein Pax-6
    3 View Details [176..497] FFAS03 3.25 No description for 2r55A was found.
    4 View Details [498..747] MSA 2.066965 View MSA. No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • binding
    		•  0.334577365229545 bayes_pls_golite062009
  • transcription regulator activity
    		•  0.0696342306231097 bayes_pls_golite062009
    3 No functions predicted.
    4 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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