| Protein: | HGL2_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 747 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for HGL2_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
774.0 | [0..39] | [746..52] |
|
Region A: Residues: [1-84] |
1 11 21 31 41 51
| | | | | |
1 MSMAVDMSSK QPTKDFFSSP ALSLSLAGIF RNASSGSTNP EEDFLGRRVV DDEDRTVEMS 60
61 SENSGPTRSR SEEDLEGEDH DDEE
|
| Detection Method: |  |
| Confidence: | 1.08 |
| Match: | 1jj2G |
| Description: | Ribosomal protein L10 |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [85-175] |
1 11 21 31 41 51
| | | | | |
1 EEEEDGAAGN KGTNKRKRKK YHRHTTDQIR HMEALFKETP HPDEKQRQQL SKQLGLAPRQ 60
61 VKFWFQNRRT QIKAIQERHE NSLLKAELEK L
|
| Detection Method: | |
| Confidence: | 18.69897 |
| Match: | 2cueA |
| Description: | Solution structure of the homeobox domain of the human paired box protein Pax-6 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.334577365229545 | bayes_pls_golite062009 |
| transcription regulator activity | 0.0696342306231097 | bayes_pls_golite062009 |
|
Region A: Residues: [176-497] |
1 11 21 31 41 51
| | | | | |
1 REENKAMRES FSKANSSCPN CGGGPDDLHL ENSKLKAELD KLRAALGRTP YPLQASCSDD 60
61 QEHRLGSLDF YTGVFALEKS RIAEISNRAT LELQKMATSG EPMWLRSVET GREILNYDEY 120
121 LKEFPQAQAS SFPGRKTIEA SRDAGIVFMD AHKLAQSFMD VGQWKETFAC LISKAATVDV 180
181 IRQGEGPSRI DGAIQLMFGE MQLLTPVVPT REVYFVRSCR QLSPEKWAIV DVSVSVEDSN 240
241 TEKEASLLKC RKLPSGCIIE DTSNGHSKVT WVEHLDVSAS TVQPLFRSLV NTGLAFGARH 300
301 WVATLQLHCE RLVFFMATNV PT
|
| Detection Method: | |
| Confidence: | 3.25 |
| Match: | 2r55A |
| Description: | No description for 2r55A was found. |
|
Region A: Residues: [498-747] |
1 11 21 31 41 51
| | | | | |
1 KDSLGVTTLA GRKSVLKMAQ RMTQSFYRAI AASSYHQWTK ITTKTGQDMR VSSRKNLHDP 60
61 GEPTGVIVCA SSSLWLPVSP ALLFDFFRDE ARRHEWDALS NGAHVQSIAN LSKGQDRGNS 120
121 VAIQTVKSRE KSIWVLQDSS TNSYESVVVY APVDINTTQL VLAGHDPSNI QILPSGFSII 180
181 PDGVESRPLV ITSTQDDRNS QGGSLLTLAL QTLINPSPAA KLNMESVESV TNLVSVTLHN 240
241 IKRSLQIEDC
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
