YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: ARP5_ARATH

General Information:
Name(s) found: ARP5_ARATH [Swiss-Prot]
Description(s) found:
Found 7 descriptions.
SHOW ALL
  • Actin-related protein 5 OS=Arabidopsis thaliana GN=ARP5 PE=1 SV=2 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 724 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAFVSRIRRQ SDYNTYPSSI PIVIDNGASY FRIGWAGETE PRVVFRNIVQ RPRHKATGET  60
   61 VTIVGDLDPS MMKYFDCTRS GPRSPFDSNV VYQFEIMEYI LDYAFDRLGA NGSGIDHPIL 120
  121 ITECACNPVQ SRSKMAELLF ETYGVPAVAF GVDAAFSYKY NQLHGICKKD GIVLCPGFTT 180
  181 THSIPFVDGE PIYKGSSRTN IGGYHVTDYL KQLLSLKYPF HSSRFTWEKA EDLKLEHCYI 240
  241 APDYASEIRL FQEGRKEAEE KTSYWQLPWI PPPTEVPPSE EEIARKAAIR EKQGQRLREM 300
  301 AEAKRVSKIN DMENQLISLR FLLKQVDQVE EDDIPTFLSD TGYASRQELE STITKVTQSL 360
  361 RKARGEPKNE PAEYEENPDS LNNEKYPLMN VPDDILTPEQ LKDKKRQMFL KTTAEGRLRA 420
  421 RQKRNEEELE KEKRNQLEEE RRRENPESYL EELQAQYKEV LERVEQKKRL KTNGSSNGNN 480
  481 KSGGIGRGER LSAAQRERMR LLTTAAFDRG KGEDTFGSRD EDWQLYKLMS KDNDDDDEQP 540
  541 DSDEAELARL SSRLQEIDPT FVQKVEGELS QTSGEVPRVR PLTEEDYKIV IGIERFRCPE 600
  601 ILFHPNLIGI DQVGLDEMAG TSIRRLPHDE KELEERLTSS ILMTGGCSLL PGMNERLECG 660
  661 IRMIRPCGSP INVVRAMDPV LDAWRGASAF AANLNFLGNA FTKMDYDEKG EDWLRNYQIR 720
  721 YNYL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..326] PSI-BLAST 102.0 Actin
    2 View Details [327..510] PSI-BLAST 14.69897 Heavy meromyosin subfragment
    3 View Details [511..724] FFAS03 6.57 Actin-related protein 3, Arp3

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2 No functions predicted.
    3
    Term Confidence Notes
  • actin binding
    		•  3.46382834535481 bayes_pls_golite062009
  • cytoskeletal protein binding
    		•  3.02581729371504 bayes_pls_golite062009
  • DNA helicase activity
    		•  2.90330038925099 bayes_pls_golite062009
  • structural constituent of cytoskeleton
    		•  2.84435320364936 bayes_pls_golite062009
  • myosin binding
    		•  2.27496736774096 bayes_pls_golite062009
  • actin filament binding
    		•  1.9970676063751 bayes_pls_golite062009
  • binding
    		•  1.9595539342237 bayes_pls_golite062009
  • histone acetyltransferase activity
    		•  1.55653918333812 bayes_pls_golite062009
  • lysine N-acetyltransferase activity
    		•  1.55653918333812 bayes_pls_golite062009
  • protein binding
    		•  0.932046075361817 bayes_pls_golite062009
  • DNA-dependent ATPase activity
    		•  0.697898025756055 bayes_pls_golite062009
  • general RNA polymerase II transcription factor activity
    		•  0.65212939968205 bayes_pls_golite062009
  • structural molecule activity
    		•  0.52001956306831 bayes_pls_golite062009
  • nucleosome binding
    		•  0.228045580226515 bayes_pls_golite062009
  • transcription coactivator activity
    		•  0.183925151793125 bayes_pls_golite062009
  • N-acetyltransferase activity
    		•  0.0528211753419159 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.96

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle