| Protein: | ARP5_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 724 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ARP5_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
371.0 | [0..12] | [318..27] |
|
Region A: Residues: [1-326] |
1 11 21 31 41 51
| | | | | |
1 MAFVSRIRRQ SDYNTYPSSI PIVIDNGASY FRIGWAGETE PRVVFRNIVQ RPRHKATGET 60
61 VTIVGDLDPS MMKYFDCTRS GPRSPFDSNV VYQFEIMEYI LDYAFDRLGA NGSGIDHPIL 120
121 ITECACNPVQ SRSKMAELLF ETYGVPAVAF GVDAAFSYKY NQLHGICKKD GIVLCPGFTT 180
181 THSIPFVDGE PIYKGSSRTN IGGYHVTDYL KQLLSLKYPF HSSRFTWEKA EDLKLEHCYI 240
241 APDYASEIRL FQEGRKEAEE KTSYWQLPWI PPPTEVPPSE EEIARKAAIR EKQGQRLREM 300
301 AEAKRVSKIN DMENQLISLR FLLKQV
|
| Detection Method: |  |
| Confidence: | 102.0 |
| Match: | 1hluA |
| Description: | Actin |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [327-510] |
1 11 21 31 41 51
| | | | | |
1 DQVEEDDIPT FLSDTGYASR QELESTITKV TQSLRKARGE PKNEPAEYEE NPDSLNNEKY 60
61 PLMNVPDDIL TPEQLKDKKR QMFLKTTAEG RLRARQKRNE EELEKEKRNQ LEEERRRENP 120
121 ESYLEELQAQ YKEVLERVEQ KKRLKTNGSS NGNNKSGGIG RGERLSAAQR ERMRLLTTAA 180
181 FDRG
|
| Detection Method: | |
| Confidence: | 14.69897 |
| Match: | 1i84S |
| Description: | Heavy meromyosin subfragment |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [511-724] |
1 11 21 31 41 51
| | | | | |
1 KGEDTFGSRD EDWQLYKLMS KDNDDDDEQP DSDEAELARL SSRLQEIDPT FVQKVEGELS 60
61 QTSGEVPRVR PLTEEDYKIV IGIERFRCPE ILFHPNLIGI DQVGLDEMAG TSIRRLPHDE 120
121 KELEERLTSS ILMTGGCSLL PGMNERLECG IRMIRPCGSP INVVRAMDPV LDAWRGASAF 180
181 AANLNFLGNA FTKMDYDEKG EDWLRNYQIR YNYL
|
| Detection Method: | |
| Confidence: | 6.57 |
| Match: | 1k8kA |
| Description: | Actin-related protein 3, Arp3 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| actin binding | 3.46382834535481 | bayes_pls_golite062009 |
| cytoskeletal protein binding | 3.02581729371504 | bayes_pls_golite062009 |
| DNA helicase activity | 2.90330038925099 | bayes_pls_golite062009 |
| structural constituent of cytoskeleton | 2.84435320364936 | bayes_pls_golite062009 |
| myosin binding | 2.27496736774096 | bayes_pls_golite062009 |
| actin filament binding | 1.9970676063751 | bayes_pls_golite062009 |
| binding | 1.9595539342237 | bayes_pls_golite062009 |
| histone acetyltransferase activity | 1.55653918333812 | bayes_pls_golite062009 |
| lysine N-acetyltransferase activity | 1.55653918333812 | bayes_pls_golite062009 |
| protein binding | 0.932046075361817 | bayes_pls_golite062009 |
| DNA-dependent ATPase activity | 0.697898025756055 | bayes_pls_golite062009 |
| general RNA polymerase II transcription factor activity | 0.65212939968205 | bayes_pls_golite062009 |
| structural molecule activity | 0.52001956306831 | bayes_pls_golite062009 |
| nucleosome binding | 0.228045580226515 | bayes_pls_golite062009 |
| transcription coactivator activity | 0.183925151793125 | bayes_pls_golite062009 |
| N-acetyltransferase activity | 0.0528211753419159 | bayes_pls_golite062009 |
