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Protein Overview: gi|106879191, gi...

General Information:
Name(s) found: gi|30678682 [NCBI NR]
gi|26453004 [NCBI NR]
gi|106879191 [NCBI NR]
Description(s) found:
Found 12 descriptions.
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  • gi|30678682|ref|NP_186931.2| zinc knuckle (CCHC-type) family protein [Arabidopsis thaliana] [NCBI NR]
  • gi|26453004|dbj|BAC43578.1| putative CCHC-type zinc finger protein [Arabidopsis thaliana] [NCBI NR]
  • gi|106879191|gb|ABF82625.1| At3g02820 [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 282 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IEA]
    chloroplast [IEA]
    Biological Process: replication fork protection [IEA]
    response to DNA damage stimulus [IEA]
    cell cycle [IEA]
    Molecular Function: nucleic acid binding [IEA][ISS]
    zinc ion binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MESAPTGCFK CGRPGHWSRD CPSSAPVAGN NSVSSSSAPS QIPNNEFQRS SSKSGTSIAP  60
   61 APKVTKTRVQ RPKLTPELLL SEDGLGYVLR YFPKSFKYRG RGKEVSDLGN LIRLYSEWHT 120
  121 HLLPYYSFDH FVHKVQQVAS TKRVKNCINE LRERVASGVD PNKLYEKQEE NTVPSDDQDM 180
  181 DQPSHDEENI PSKSVDADTN ADAFEDSMLN EIFDNASKLP SDEQNMDKSS ELTEEQRARM 240
  241 EANRLKAMEK AQNISEEQRV RMEANRLKAL ERAKARLQPN QD

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..192] Pfam 43.102373 No description for PF07962.3 was found. No confident structure predictions are available.
    2 View Details [193..282] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle