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Protein Overview: gi|26451861, gi|...

General Information:
Name(s) found: gi|29028984 [NCBI NR]
gi|26451861 [NCBI NR]
gi|15241217 [NCBI NR]
Description(s) found:
Found 12 descriptions.
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  • gi|29028984|gb|AAO64871.1| At5g19920 [Arabidopsis thaliana] [NCBI NR]
  • gi|26451861|dbj|BAC43023.1| putative TipD like WD repeat protein [Arabidopsis thaliana] [NCBI NR]
  • gi|15241217|ref|NP_197492.1| transducin family protein / WD-40 repeat family protein [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 656 amino acids

    Gene Ontology:
    Cellular Component: CUL4 RING ubiquitin ligase complex [ISS]
    Biological Process: biological_process [ND]
    Molecular Function: nucleotide binding [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATTAMNKPK IEQGEEVEVE AEARTFSTQI PDDREALLEF MDQRAKSIQR LKDQISSLDR  60
   61 KLAEERKLMA DAEAKFLQID RVGNGIFSKS KPKAPGKTGS ILGIAEFWNE GNKTKTANEN 120
  121 STPQSPSEME SLKLPSIILP PSFKRRASAT VRAEVNETTQ AQPMATRDYN IPREDTCGPE 180
  181 AKRPRSIPDE VVRETQDRDK ETQPMATRGY DVPKEDKSGP EARRLRSIPD EVVRESQGRD 240
  241 NAAQPMATRD SNVPKEDKSG LDKRSRSIPN EVAQAPDNHT NKDLAKPRIR VSSNISQQGQ 300
  301 QEKSEFRGHD ELIALIGRSS LRPTIEGRTA GMLPSCHTKR MRSLALSPSN RELFATSALD 360
  361 GAVHFWKLQS DRSTATLFKT VNRVAVDQKK WAEDIAWHPH KNALFSVYTA DDGHPQISAI 420
  421 YLNEAGERCE SQFMEDRPHS KGLINRIMFT PWDDPCFITG GSDHAVVLWR DQCENNAWKP 480
  481 TLLHRDLHSS AVMGVTGMRH NNHVLSCGDD RRFVGFDARE EKVTFKHRLD NRCTNIMPNP 540
  541 RDVNLVMVNT RQLDRQLRLY DVRLPQTELF SFGWKQESSE SQSALINQSW SPDGLHISSG 600
  601 SADPVIHIFD IRYNAPSPSL SMKAHKKRVF KAEWHSSYPL LVSISSDLAI GIHKLW

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..91] deduced N/A Confident ab initio structure predictions are available.
    2 View Details [92..582] PSI-BLAST 7.522879 Tricorn protease; Tricorn protease N-terminal domain; Tricorn protease domain 2
    3 View Details [583..656] PSI-BLAST 71.522879 PAF-AH Holoenzyme: Lis1/Alfa2


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.97

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle