| Protein: | gi|26451861, gi|... |
| Organism: | Arabidopsis thaliana |
| Length: | 656 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|26451861, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
604.0 | [0..38] | [655..1155] |
|
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594.0 | [0..40] | [655..891] |
|
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592.0 | [0..39] | [655..1028] |
|
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573.0 | [0..23] | [643..616] |
|
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568.0 | [0..13] | [653..910] |
|
|
565.0 | [0..34] | [654..842] |
|
|
560.0 | [0..58] | [654..573] |
|
Region A: Residues: [1-91] |
1 11 21 31 41 51
| | | | | |
1 MATTAMNKPK IEQGEEVEVE AEARTFSTQI PDDREALLEF MDQRAKSIQR LKDQISSLDR 60
61 KLAEERKLMA DAEAKFLQID RVGNGIFSKS K
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.961 | a.23.1 | HSC20 (HSCB), C-terminal oligomerisation domain |
|
Region A: Residues: [92-582] |
1 11 21 31 41 51
| | | | | |
1 PKAPGKTGSI LGIAEFWNEG NKTKTANENS TPQSPSEMES LKLPSIILPP SFKRRASATV 60
61 RAEVNETTQA QPMATRDYNI PREDTCGPEA KRPRSIPDEV VRETQDRDKE TQPMATRGYD 120
121 VPKEDKSGPE ARRLRSIPDE VVRESQGRDN AAQPMATRDS NVPKEDKSGL DKRSRSIPNE 180
181 VAQAPDNHTN KDLAKPRIRV SSNISQQGQQ EKSEFRGHDE LIALIGRSSL RPTIEGRTAG 240
241 MLPSCHTKRM RSLALSPSNR ELFATSALDG AVHFWKLQSD RSTATLFKTV NRVAVDQKKW 300
301 AEDIAWHPHK NALFSVYTAD DGHPQISAIY LNEAGERCES QFMEDRPHSK GLINRIMFTP 360
361 WDDPCFITGG SDHAVVLWRD QCENNAWKPT LLHRDLHSSA VMGVTGMRHN NHVLSCGDDR 420
421 RFVGFDAREE KVTFKHRLDN RCTNIMPNPR DVNLVMVNTR QLDRQLRLYD VRLPQTELFS 480
481 FGWKQESSES Q
|
| Detection Method: | |
| Confidence: | 7.522879 |
| Match: | 1k32A |
| Description: | Tricorn protease; Tricorn protease N-terminal domain; Tricorn protease domain 2 |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [583-656] |
1 11 21 31 41 51
| | | | | |
1 SALINQSWSP DGLHISSGSA DPVIHIFDIR YNAPSPSLSM KAHKKRVFKA EWHSSYPLLV 60
61 SISSDLAIGI HKLW
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| Detection Method: | |
| Confidence: | 71.522879 |
| Match: | 1vyhC |
| Description: | PAF-AH Holoenzyme: Lis1/Alfa2 |
Matching Structure (courtesy of the PDB): |
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