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Protein Overview: PUB56_ARATH

General Information:
Name(s) found: PUB56_ARATH [Swiss-Prot]
Description(s) found:
Found 10 descriptions.
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  • U-box domain-containing protein 56 OS=Arabidopsis thaliana GN=PUB56 PE=2 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 365 amino acids

    Gene Ontology:
    Cellular Component: ubiquitin ligase complex [IEA]
    Biological Process: protein ubiquitination [IEA]
    Molecular Function: ubiquitin-protein ligase activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTPSSSGLEQ SEIDAIQELE QTSRNDTLLK YHDICIDEGV IEQDVDMSCF SANSVGEWIV  60
   61 ELIYQNNIKK LIMGATADSH YSEGMVHITP TKADYVIQHA PHCCNIWLVC NGNLIQTREG 120
  121 RFEHAGSAYS SSSSLHSIDS ALIPYGGAGR AERVTEPHAL SSSEEQSARG IEKMYYEEQR 180
  181 RRLEIEELKR EKEQRDKMRR VREEALSSSS GVTKILYNEE VMRRREVEAE LNRAKAEIED 240
  241 MKRVQIELKE QHYADCRLLE KERDEAIKTT EELLRALEKG ESSIPLQWSV SIEPPQCFIC 300
  301 PISKDIMQNP HVAADGYTYE ADEFRRWLNH GGEKSPMTNL RLENRNLIPN LVLRSAIKDW 360
  361 LQQHP

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..365] PSI-BLAST 30.39794 No description for 2qizA was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle