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View Structure Prediction Details

Protein: PUB56_ARATH
Organism: Arabidopsis thaliana
Length: 365 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PUB56_ARATH.

Description E-value Query
Range
Subject
Range
PUB37_ARATH - U-box domain-containing protein 37 OS=Arabidopsis thaliana GN=PUB37 PE=2 SV=1
181.0 [0..11] [361..46]

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Predicted Domain #1
Region A:
Residues: [1-365]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTPSSSGLEQ SEIDAIQELE QTSRNDTLLK YHDICIDEGV IEQDVDMSCF SANSVGEWIV  60
   61 ELIYQNNIKK LIMGATADSH YSEGMVHITP TKADYVIQHA PHCCNIWLVC NGNLIQTREG 120
  121 RFEHAGSAYS SSSSLHSIDS ALIPYGGAGR AERVTEPHAL SSSEEQSARG IEKMYYEEQR 180
  181 RRLEIEELKR EKEQRDKMRR VREEALSSSS GVTKILYNEE VMRRREVEAE LNRAKAEIED 240
  241 MKRVQIELKE QHYADCRLLE KERDEAIKTT EELLRALEKG ESSIPLQWSV SIEPPQCFIC 300
  301 PISKDIMQNP HVAADGYTYE ADEFRRWLNH GGEKSPMTNL RLENRNLIPN LVLRSAIKDW 360
  361 LQQHP

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Detection Method: PSI-BLAST
Confidence: 30.39794
Match: 2qizA
Description: No description for 2qizA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle