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Protein Overview: RDM4_ARATH

General Information:
Name(s) found: RDM4_ARATH [Swiss-Prot]
Description(s) found:
Found 10 descriptions.
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  • RNA-directed DNA methylation 4 OS=Arabidopsis thaliana GN=RDM4 PE=1 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 346 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: DNA methylation [IGI][IMP]
    post-embryonic development [IMP]
    chromatin silencing [IGI][IMP]
    developmental process [IGI]
    regulation of transcription [IGI]
    Molecular Function: transcription factor activity [IMP]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDGVGESSTQ NEVEEKPVIV RVKRKVGQSL LDAFWLEINE RPLKRPTLDF SKLSISDSGE  60
   61 RGPSVAEDVK PKKVLVRHLE TVTDSETTAD IIHSFFESDH NEKSCSKGKF EERKIAFKKD 120
  121 NRKEQRLTKS VQKQQIASEN ARFEQIWRSR KGNKEGIHEK CHFFDVIRVD TEERRDNAQE 180
  181 FTSLEDQKML ASFLPLLREC IPTAAEEIEA DIQSSHTEEY VYDYYAVNEE MDISEDSSKN 240
  241 QFPLVIVEDE EEFCDGSDES DYDSEDSNAE DHPKTDYPEE EEEEEEEDDD DDDDDESEEE 300
  301 KSEASDESDD EETSKRHVRS VLGDDEFDDY AEDVYGYSES DEEFES

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..151] deduced N/A No confident structure predictions are available.
    2 View Details [152..346] MSA 5.037991 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle