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View Structure Prediction Details

Protein: RDM4_ARATH
Organism: Arabidopsis thaliana
Length: 346 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for RDM4_ARATH.

Description E-value Query
Range
Subject
Range
SLC7A6OS - solute carrier family 7, member 6 opposite strand
259.0 [0..16] [333..5]

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Predicted Domain #1
Region A:
Residues: [1-151]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDGVGESSTQ NEVEEKPVIV RVKRKVGQSL LDAFWLEINE RPLKRPTLDF SKLSISDSGE  60
   61 RGPSVAEDVK PKKVLVRHLE TVTDSETTAD IIHSFFESDH NEKSCSKGKF EERKIAFKKD 120
  121 NRKEQRLTKS VQKQQIASEN ARFEQIWRSR K

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [152-346]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GNKEGIHEKC HFFDVIRVDT EERRDNAQEF TSLEDQKMLA SFLPLLRECI PTAAEEIEAD  60
   61 IQSSHTEEYV YDYYAVNEEM DISEDSSKNQ FPLVIVEDEE EFCDGSDESD YDSEDSNAED 120
  121 HPKTDYPEEE EEEEEEDDDD DDDDESEEEK SEASDESDDE ETSKRHVRSV LGDDEFDDYA 180
  181 EDVYGYSESD EEFES

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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