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View Structure Prediction Details

Protein: RDM4_ARATH
Organism: Arabidopsis thaliana
Length: 346 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for RDM4_ARATH.

Description E-value Query
Range
Subject
Range
SLC7A6OS - solute carrier family 7, member 6 opposite strand
259.0 [0..16] [333..5]

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Predicted Domain #1
Region A:
Residues: [1-151]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDGVGESSTQ NEVEEKPVIV RVKRKVGQSL LDAFWLEINE RPLKRPTLDF SKLSISDSGE  60
   61 RGPSVAEDVK PKKVLVRHLE TVTDSETTAD IIHSFFESDH NEKSCSKGKF EERKIAFKKD 120
  121 NRKEQRLTKS VQKQQIASEN ARFEQIWRSR K

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [152-346]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GNKEGIHEKC HFFDVIRVDT EERRDNAQEF TSLEDQKMLA SFLPLLRECI PTAAEEIEAD  60
   61 IQSSHTEEYV YDYYAVNEEM DISEDSSKNQ FPLVIVEDEE EFCDGSDESD YDSEDSNAED 120
  121 HPKTDYPEEE EEEEEEDDDD DDDDESEEEK SEASDESDDE ETSKRHVRSV LGDDEFDDYA 180
  181 EDVYGYSESD EEFES

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


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