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Protein Overview: gi|4581205, gi|9...

General Information:
Name(s) found: gi|9758363 [NCBI NR]
gi|4581205 [NCBI NR]
gi|42573714 [NCBI NR]
gi|25453537 [NCBI NR]
Description(s) found:
Found 12 descriptions.
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  • gi|9758363|dbj|BAB08864.1| cyclic nucleotide and calmodulin-regulated ion channel [Arabidopsis thaliana] [NCBI NR]
  • gi|4581205|emb|CAB40130.1| cyclic nucleotide and calmodulin-regulated ion channel [Arabidopsis thaliana] [NCBI NR]
  • gi|42573714|ref|NP_974953.1| ATCNGC5 (CYCLIC NUCLEOTIDE GATED CHANNEL 5); calmodulin binding / cyclic nucleotide binding / potassium channel [Arabidopsis thaliana] [NCBI NR]
  • pir||T52573 cyclic nucleotide and calmodulin-regulated ion channel [imported] - Arabidopsis thaliana [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 710 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAGKRENFVR LPSSSVAFQQ NYASNFSGQL HPIHASNETS RSFKKGIQKG SKGLKSIGRS  60
   61 LGFGVYRAVF PEDLKVSEKK IFDPQDKFLL YCNKLFVASC ILSVFVDPFF FYLPVINAES 120
  121 KCLGIDRKLA ITASTLRTFI DVFYLAHMAL QLRTAYIAPS SRVFGRGELV IDPAQIAKRY 180
  181 LQRWFIIDFL SVLPLPQIVV WRFLQSSNGS DVLATKQALL FIVLVQYIPR FLRVLPLTSE 240
  241 LKRTAGVFAE TAWAGAAYYL LLYMLASHIV GAFWYLLALE RNDACWQEAC IDAGNCSTDF 300
  301 LYCGNQNMDG YAVWNRAKES VLKSKCRADL DDNNPPFDFG IYTQALSSGI VSSQNFIVKY 360
  361 CYCLWWGLQN LSTLGQGLET STYPMEIIFS ISLAISGLIL FALLIGNMQT YLQSLTIRLE 420
  421 EMRVKRRDSE QWMHHRMLPQ DLRERVRRYD QYKWLETRGV DEEYLVQNLP KDLRRDIKRH 480
  481 LCLALVRRVP LFKSMDDKLL DAICMRLKPC LFTESTYLVR EGDPVDEMLF IIRGRLESVT 540
  541 TDGGRSGFFN RSLLKEGEFC GEELLTWALD PKSGVNLPSS TRTVKALTEV EAFALTSEEL 600
  601 KFVASQFRRL HSRQVQHTFR FYSHQWRTWA ACFIQAAWRR YCKRKKMEEA EAEAAAVSSS 660
  661 TAGPSYSIGA AFLATKFAAN ALRTIHRNRN TKIRDLVKLQ KPPEPDFTAD

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..78] deduced N/A No confident structure predictions are available.
    2 View Details [79..488] PSI-BLAST 48.221849 Mammalian Shaker Kv1.2 potassium channel- beta subunit complex
    3 View Details [489..622] PSI-BLAST 11.69897 Solution structure of the cNMP-binding domain from Arabidopsis thaliana cyclic nucleotide-regulated ion channel
    4 View Details [623..710] deduced N/A Confident ab initio structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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