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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|4581205, gi|9...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.72
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAGKRENFVR LPSSSVAFQQ NYASNFSGQL HPIHASNETS RSFKKGIQKG SKGLKSIGRS  60
   61 LGFGVYRAVF PEDLKVSEKK IFDPQDKFLL YCNKLFVASC ILSVFVDPFF FYLPVINAES 120
  121 KCLGIDRKLA ITASTLRTFI DVFYLAHMAL QLRTAYIAPS SRVFGRGELV IDPAQIAKRY 180
  181 LQRWFIIDFL SVLPLPQIVV WRFLQSSNGS DVLATKQALL FIVLVQYIPR FLRVLPLTSE 240
  241 LKRTAGVFAE TAWAGAAYYL LLYMLASHIV GAFWYLLALE RNDACWQEAC IDAGNCSTDF 300
  301 LYCGNQNMDG YAVWNRAKES VLKSKCRADL DDNNPPFDFG IYTQALSSGI VSSQNFIVKY 360
  361 CYCLWWGLQN LSTLGQGLET STYPMEIIFS ISLAISGLIL FALLIGNMQT YLQSLTIRLE 420
  421 EMRVKRRDSE QWMHHRMLPQ DLRERVRRYD QYKWLETRGV DEEYLVQNLP KDLRRDIKRH 480
  481 LCLALVRRVP LFKSMDDKLL DAICMRLKPC LFTESTYLVR EGDPVDEMLF IIRGRLESVT 540
  541 TDGGRSGFFN RSLLKEGEFC GEELLTWALD PKSGVNLPSS TRTVKALTEV EAFALTSEEL 600
  601 KFVASQFRRL HSRQVQHTFR FYSHQWRTWA ACFIQAAWRR YCKRKKMEEA EAEAAAVSSS 660
  661 TAGPSYSIGA AFLATKFAAN ALRTIHRNRN TKIRDLVKLQ KPPEPDFTAD 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle