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Protein Overview: gi|228771520, gi...

General Information:
Name(s) found: gi|228988223 [NCBI NR]
gi|228771520 [NCBI NR]
Description(s) found:
Found 2 descriptions.
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  • gi|228988223|ref|ZP_04148320.1| cysteine desulfurase [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] [NCBI NR]
  • gi|228771520|gb|EEM19989.1| cysteine desulfurase [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] [NCBI NR]
    • Organism: Bacillus thuringiensis serovar tochigiensis BGSC 4Y1
    Length: 406 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNIHEIRKQF PILDQKVNGK QLVYFDSAAT SQKPIQVIET LERYYKEYNS NVHRGVHTLG  60
   61 TKATDAYEGA REKVRKFINA KSMEEIIFTR GTTTALNTVA ASYGLENVKE GDEIVISYME 120
  121 HHSNIIPWQQ VAKKTGATLK YLPLQPDGTI SIEDARQTIT PNTKIVSIMY VSNVLGTINP 180
  181 VKEIGAIAHE NGAIMVVDGA QSTPHMKVDV QDLNCDFYAL SAHKMCGPTG IGVLYGKKEL 240
  241 LNNMEPIEFG GEMIDFVDLQ ESTWKELPWK FEAGTPIIGN AIGLGAAIDF LEEIGLDNIE 300
  301 KHEHELAQYA LERLSEVDGV TIYGPKHRAG LVTFNIEDVH PHDVATVLDV EGIAVRAGHH 360
  361 CAQPLMKWLK ASSTARASFY LYNTKEEIDT FVESLIKTKE YFTNVI

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..406] PSI-BLAST 84.0 Structure of slr0077/SufS, the Essential Cysteine Desulfurase from Synechocystis PCC 6803

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • glycine dehydrogenase (decarboxylating) activity
    		•  2.82824364293374 bayes_pls_golite062009
  • oxidoreductase activity, acting on the CH-NH2 group of donors, disulfide as acceptor
    		•  2.82824364293374 bayes_pls_golite062009
  • catalytic activity
    		•  2.29878871754893 bayes_pls_golite062009
  • transferase activity
    		•  1.44093490824786 bayes_pls_golite062009
  • transferase activity, transferring nitrogenous groups
    		•  1.28316822767388 bayes_pls_golite062009
  • transaminase activity
    		•  1.24990480711889 bayes_pls_golite062009
  • carbon-sulfur lyase activity
    		•  0.698312655247044 bayes_pls_golite062009
  • cysteine desulfurase activity
    		•  0.67931229352972 bayes_pls_golite062009
  • binding
    		•  0.653761928322079 bayes_pls_golite062009
  • cystathionine gamma-lyase activity
    		•  0.505859361763689 bayes_pls_golite062009
  • cystathionine beta-lyase activity
    		•  0.27933426619091 bayes_pls_golite062009
  • glycine hydroxymethyltransferase activity
    		•  0.271623203801431 bayes_pls_golite062009
  • O-phospho-L-serine:2-oxoglutarate aminotransferase activity
    		•  0.234399054481664 bayes_pls_golite062009
  • pyridoxal phosphate binding
    		•  0.16957228630576 bayes_pls_golite062009
  • vitamin B6 binding
    		•  0.16957228630576 bayes_pls_golite062009
  • L-aspartate:2-oxoglutarate aminotransferase activity
    		•  0.13686553668007 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.013097682076602 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle