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Protein Overview: AT12A_ARATH

General Information:
Name(s) found: AT12A_ARATH [Swiss-Prot]
Description(s) found:
Found 16 descriptions.
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  • Ubiquitin-like protein ATG12A OS=Arabidopsis thaliana GN=ATG12A PE=1 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 96 amino acids

    Gene Ontology:
    Cellular Component: cytoplasm [IEA]
    Biological Process: autophagy [IGI][ISS]
    protein ubiquitination during ubiquitin-dependent protein catabolic process [ISS]
    Molecular Function: protein binding [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATESSSPSS VRKVVVHLRA TGGAPILKQS KFKIPGTDKF AKVIDFLRRQ LHSDSLFVYV  60
   61 NSAFSPNPDE SVIDLYNNFG FDGKLVVNYA CSMAWG

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..96] PSI-BLAST 35.522879 The crystal structure of plant ATG12


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle