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Protein Overview: gi|22655342, gi|...

General Information:
Name(s) found: gi|22655342 [NCBI NR]
gi|22329713 [NCBI NR]
gi|18086338 [NCBI NR]
Description(s) found:
Found 10 descriptions.
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  • gi|22655342|gb|AAM98263.1| At1g21590/F24J8_9 [Arabidopsis thaliana] [NCBI NR]
  • gi|22329713|ref|NP_173578.2| protein kinase family protein [Arabidopsis thaliana] [NCBI NR]
  • gi|18086338|gb|AAL57632.1| At1g21590/F24J8_9 [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 756 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: protein amino acid phosphorylation [IEA]
    response to stress [IEA]
    Molecular Function: ATP binding [IEA]
    protein kinase activity [IEA]
    protein serine/threonine kinase activity [IEA]
    kinase activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTENGVVTGG GHTVMVGVKF DESSNELLDW ALVKVAEPGD TVIALHVLGN EIVDRADNSS  60
   61 LVSIVKNFDS VLEVYEGFCK LKQLELKLKL SRGSSTRKIL VKEAKMCSAS KVVVGISRRF 120
  121 HTIHSSVSVA KYLARKVAKD CWVLAVDNGK VMFQKDGSSS IIHHSKGKSD ARRNTLSSFF 180
  181 QMPVTLRKNT KVVNHSEVEE EEAEEDHSNG QSLRRSLVYA CLGNCSVRDM NSLPTPGNLS 240
  241 RSSSCNGDQD DNADLHKAMA LVPAKFPEDL TPFITMLVKE LPEFRPGWPL LCRVASSDVL 300
  301 ASAPRSSSFR KIPVVQWVLK LPARTNSVVG SSDTKQIGFD SSESEENDKL SSSNVERQAI 360
  361 VPDESMIVKC SLDHSSGRFP ENVEGLQARI STSCQFFTYK ELVSVTSNFC ADNFIGKGGS 420
  421 SRVFRGYLPN GREVAVKILK RTECVLKDFV AEIDIITTLH HKNVISLLGY CFENNNLLLV 480
  481 YNYLSRGSLE ENLHGNKKDL VAFRWNERYK VAVGIAEALD YLHNDAPQPV IHRDVKSSNI 540
  541 LLSDDFEPQL SDFGLAKWAS ESTTQIICSD VAGTFGYLAP EYFMYGKMNN KIDVYAYGVV 600
  601 LLELLSGRKP VNSESPKAQD SLVMWAKPIL DDKEYSQLLD SSLQDDNNSD QMEKMALAAT 660
  661 LCIRHNPQTR PTMGMVLELL KGDVEMLKWA KLQVSNPLED SMLLKDEKLR RSNLQSHLNL 720
  721 AFLDMEDDSL SMGSMEQGIS VEEYLKGRTS RSSSFN

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..383] PSI-BLAST 3.522879 Crystal structure of the dimeric protein core of decorin, the archetypal small leucine-rich repeat proteoglycan
    2 View Details [384..756] PSI-BLAST 72.69897 No description for 2qkwB was found.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • signal transducer activity
    		•  2.54176035045352 bayes_pls_golite062009
  • molecular transducer activity
    		•  2.54176035045352 bayes_pls_golite062009
  • receptor activity
    		•  2.44108148686445 bayes_pls_golite062009
  • transmembrane receptor activity
    		•  2.25077658159974 bayes_pls_golite062009
  • binding
    		•  1.87302803330255 bayes_pls_golite062009
  • protein binding
    		•  1.69661396118522 bayes_pls_golite062009
  • protein kinase activity
    		•  1.43632437878638 bayes_pls_golite062009
  • phosphotransferase activity, alcohol group as acceptor
    		•  1.16530645523007 bayes_pls_golite062009
  • transferase activity, transferring phosphorus-containing groups
    		•  1.12585418084562 bayes_pls_golite062009
  • kinase activity
    		•  1.11577341189523 bayes_pls_golite062009
  • G-protein coupled receptor activity
    		•  1.04507575991279 bayes_pls_golite062009
  • transferase activity
    		•  0.435331931559158 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.370391722473665 bayes_pls_golite062009
  • receptor binding
    		•  0.319201203357304 bayes_pls_golite062009
  • protein tyrosine kinase activity
    		•  0.231213253402712 bayes_pls_golite062009
  • enzyme regulator activity
    		•  0.154501444195573 bayes_pls_golite062009
    2 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle