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Protein Overview: gi|229690909, gi...

General Information:
Name(s) found: gi|229842599 [NCBI NR]
gi|229690909 [NCBI NR]
Description(s) found:
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  • gi|229842599|ref|ZP_04462754.1| transketolase 1 [Yersinia pestis biovar Orientalis str. India 195] [NCBI NR]
  • gi|229690909|gb|EEO82963.1| transketolase 1 [Yersinia pestis biovar Orientalis str. India 195] [NCBI NR]
    • Organism: Yersinia pestis biovar Orientalis str. India 195
    Length: 664 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSRKELANA IRALSMDAVQ KAKSGHPGAP MGMADIAEVL WRDYLNHNPT NPHWADRDRF  60
   61 VLSNGHGSML IYSLLHLTGY DLPMEELKNF RQLHSKTPGH PEYGYTAGVE TTTGPLGQGI 120
  121 ANAVGFAIAE RTLGAQFNRP GHDIVDHHTY AFMGDGCMME GISHEVCSLA GTMKLGKLTA 180
  181 FYDDNGISID GHVEGWFTDD TAARFEAYGW HVVRGVDGHN ADSIKAAIEE AHKVTDKPSL 240
  241 LMCKTIIGFG SPNKAGTHDS HGAPLGEAEV AATREALGWK YPAFEIPQDI YAAWDAKEAG 300
  301 KAKEAAWNEK FAAYAKAYPE LAAEFKRRVS GELPANWAVE SKKFIEQLQA NPANIASRKA 360
  361 SQNALEAFGK VLPEFLGGSA DLAPSNLTIW SGSKSLSDDL AGNYIHYGVR EFGMSAIMNG 420
  421 IALHGGFIPY GATFLMFVEY ARNAVRMAAL MKIRSVFVYT HDSIGLGEDG PTHQPVEQMA 480
  481 SLRVTPNMST WRPCDQVESA VAWQYALERK DGPSALIFSR QNLAQQPRTA EQLANIAKGG 540
  541 YVLKDCAGQP ELILIATGSE VELAVAAADQ LTATGRKVRV VSMPSTDAFD KQDAAYRESV 600
  601 LPSAVSARVA VEAGIADYWY KYVGLNGAVV GMTTFGESAP AELLFKEFGF TVENVVAKAQ 660
  661 ALLK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..664] PSI-BLAST 1000.0 Transketolase (TK), Pyr module; Transketolase (TK), PP module; Transketolase (TK), C-domain

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • transketolase activity
    		•  7.85070252105246 bayes_pls_golite062009
  • transferase activity, transferring aldehyde or ketonic groups
    		•  4.74831149446647 bayes_pls_golite062009
  • oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
    		•  2.93250853993668 bayes_pls_golite062009
  • pyruvate dehydrogenase activity
    		•  2.81702263447118 bayes_pls_golite062009
  • pyruvate dehydrogenase (acetyl-transferring) activity
    		•  2.6977837113283 bayes_pls_golite062009
  • catalytic activity
    		•  2.25537597692103 bayes_pls_golite062009
  • binding
    		•  0.980920092099572 bayes_pls_golite062009
  • transferase activity
    		•  0.413024577830522 bayes_pls_golite062009
  • thiamin pyrophosphate binding
    		•  0.297191393111081 bayes_pls_golite062009
  • acetolactate synthase activity
    		•  0.173822256668691 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.63

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle