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Protein Overview: PSD2B_ARATH

General Information:
Name(s) found: PSD2B_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|32700012|gb|AAP86656.1| 26S proteasome subunit RPN1b [Arabidopsis thaliana] [NCBI NR]
  • gi|240256099|ref|NP_194576.5| RPN1B (26S PROTEASOME REGULATORY SUBUNIT S2 1B); binding / enzyme regulator [Arabidopsis thaliana] [NCBI NR]
  • 26S proteasome non-ATPase regulatory subunit 2 1B OS=Arabidopsis thaliana GN=RPN1B PE=2 SV=1 [Swiss-Prot]
  • 26S proteasome non-ATPase regulatory subunit 2 homolog B OS=Arabidopsis thaliana GN=RPN1B PE=1 SV=1 [Swiss-Prot]
  • 26S proteasome subunit RPN1b [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 26S proteasome subunit RPN1b [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: RPN1B, ATRPN1B | 26S proteasome regulatory subunit S2 1B | chr4:14067082-14072357 REVERSE LENGTH=891 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
    • Organism: Arabidopsis thaliana
    Length: 891 amino acids

    Gene Ontology:
    Cellular Component: proteasome regulatory particle, base subcomplex [TAS]
    Biological Process: protein catabolic process [TAS]
    Molecular Function: binding [IEA]
    enzyme regulator activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAPVPDPNSV GGGAKRDEAT TKIPSKDSKK KDDKKEEDLS EEDLQLKQNL ELYVERVQDP  60
   61 NPELQKIALE SMRKEIRDST SSMTSVPKPL KFLRPHYGVL KEFHAKMAES DLKKMLADIL 120
  121 SVLALTMSAE GERESLNYRL NGSESDIGSW GHEYVRNLAG EIAKEYTIRQ GEESSIEDLM 180
  181 DLVQQIVSFH MKHNAETEAV DLLMDVEDLD LLLEHVDNTN FRRTCNYLTS AAKYLPGPDD 240
  241 MLVLDIAYMI YIKFAEYPNA LQIALFLDNM QYVKQVFTSC TDLVKKKQFC YMIARHGMTF 300
  301 ELDQEMVAND EDKEALQDIV NNSKLSEGYL TLARDIEVME AKTPEDIYKA HLLDGRASSG 360
  361 PSVDSARQNL SATFVNAFVN AGFGQDKLMT VPSDSTSGSA GNWLFKNKEH GKTSAVASLG 420
  421 MIQLWDVETG LGHLDKYFHS NDNPVVAGAL LGVGIVNCGI KNDCDPAFAL LSGYIDNEDS 480
  481 SVRIGAIMGL GIAYAGSQND QIKIRLSPIL NDANAPLDVI AFAALSLGMI YVGSCNEEVA 540
  541 QSIIFALMDR SEAELGEALT RFLPLGLGLL YLGKQESVEA TAEVSKTFNE KIRKYCDMTL 600
  601 LSCAYAGTGN VLKVQDLLAQ CGEHLVKGDI HQGPAVIGLA MVAMSEELGL DMEIRSLERV 660
  661 LQYGEQNIRR AVPLALGLLC ISNPKVTVMD TLSRLSHDTD SEVAMAAIIS LGLIGAGTNN 720
  721 ARIAGMLRNL SSYYYKDASL LFCVRIAQGF VHMGKGLLTL NPFHSERLLL SPTALAGIVT 780
  781 LLHACLDMKS IILGKYHYVL YFLVLAMQPR MMLTVDQSLK PISVPVRVGQ AVDVVGQAGR 840
  841 PKTITGFQTH STPVLLAAGE RAELATEKYI PLSPILEGFV ILKENPDYRE E

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..88] deduced N/A No confident structure predictions are available.
    2 View Details [89..785] PSI-BLAST 35.30103 Karyopherin beta2
    3 View Details [786..891] PSI-BLAST 17.69897 No description for 2vglB was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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