| Protein: | PSD2B_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 891 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
No multiple sequence alignment data found for PSD2B_ARATH.
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Region A: Residues: [1-88] |
1 11 21 31 41 51
| | | | | |
1 MAPVPDPNSV GGGAKRDEAT TKIPSKDSKK KDDKKEEDLS EEDLQLKQNL ELYVERVQDP 60
61 NPELQKIALE SMRKEIRDST SSMTSVPK
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
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Region A: Residues: [89-785] |
1 11 21 31 41 51
| | | | | |
1 PLKFLRPHYG VLKEFHAKMA ESDLKKMLAD ILSVLALTMS AEGERESLNY RLNGSESDIG 60
61 SWGHEYVRNL AGEIAKEYTI RQGEESSIED LMDLVQQIVS FHMKHNAETE AVDLLMDVED 120
121 LDLLLEHVDN TNFRRTCNYL TSAAKYLPGP DDMLVLDIAY MIYIKFAEYP NALQIALFLD 180
181 NMQYVKQVFT SCTDLVKKKQ FCYMIARHGM TFELDQEMVA NDEDKEALQD IVNNSKLSEG 240
241 YLTLARDIEV MEAKTPEDIY KAHLLDGRAS SGPSVDSARQ NLSATFVNAF VNAGFGQDKL 300
301 MTVPSDSTSG SAGNWLFKNK EHGKTSAVAS LGMIQLWDVE TGLGHLDKYF HSNDNPVVAG 360
361 ALLGVGIVNC GIKNDCDPAF ALLSGYIDNE DSSVRIGAIM GLGIAYAGSQ NDQIKIRLSP 420
421 ILNDANAPLD VIAFAALSLG MIYVGSCNEE VAQSIIFALM DRSEAELGEA LTRFLPLGLG 480
481 LLYLGKQESV EATAEVSKTF NEKIRKYCDM TLLSCAYAGT GNVLKVQDLL AQCGEHLVKG 540
541 DIHQGPAVIG LAMVAMSEEL GLDMEIRSLE RVLQYGEQNI RRAVPLALGL LCISNPKVTV 600
601 MDTLSRLSHD TDSEVAMAAI ISLGLIGAGT NNARIAGMLR NLSSYYYKDA SLLFCVRIAQ 660
661 GFVHMGKGLL TLNPFHSERL LLSPTALAGI VTLLHAC
|
| Detection Method: | |
| Confidence: | 35.30103 |
| Match: | 1qbkB |
| Description: | Karyopherin beta2 |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [786-891] |
1 11 21 31 41 51
| | | | | |
1 LDMKSIILGK YHYVLYFLVL AMQPRMMLTV DQSLKPISVP VRVGQAVDVV GQAGRPKTIT 60
61 GFQTHSTPVL LAAGERAELA TEKYIPLSPI LEGFVILKEN PDYREE
|
| Detection Method: | |
| Confidence: | 17.69897 |
| Match: | 2vglB |
| Description: | No description for 2vglB was found. |
