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Protein Overview: gi|37527807, gi|...

General Information:
Name(s) found: gi|37527807 [NCBI NR]
gi|36787243 [NCBI NR]
Description(s) found:
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  • gi|37527807|ref|NP_931152.1| cyclic 3',5'-adenosine monophosphate phosphodiesterase [Photorhabdus luminescens subsp. laumondii TTO1] [NCBI NR]
  • gi|36787243|emb|CAE16324.1| Icc protein [Photorhabdus luminescens subsp. laumondii TTO1] [NCBI NR]
  • Icc protein [Photorhabdus luminescens subsp. laumondii TTO1]gi|37527807|ref|NP_931152.1| Icc protein [Photorhabdus luminescens subsp. laumondii TTO1] [nrdb_11152004_Chlamydomonas]
  • Icc protein [Photorhabdus luminescens subsp. laumondii TTO1] [nr-271106-contam.fasta]
    • Organism: Photorhabdus luminescens subsp. laumondii TTO1
    Length: 279 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MESQFELPVV EGTTAKILQI TDTHLFASKE DTLLGINTYR SYQAVLDAIL KQNADIDLIV  60
   61 ATGDLVQDQS LEAYRHFADG IARLPAPCVW LPGNHDYQPA MVDALAAAGV SPSKQILVGK 120
  121 HWQLLMLDSQ VQGVPHGELS EYQLEWMKNC LDRHPERYAV ILLHHHPLPS GCTWLDQHSL 180
  181 RNSHILAQYL QSYSRVKAML CGHIHQEMDL DWNGIRMMAT PSTCLQFKPH CTNFMLDTVA 240
  241 PGWRYLELSV ADNGEFGLTT QVYRLASNEF CPDLDSDGY

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..279] PSI-BLAST 32.045757 No description for 2hy1A was found.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • phosphoprotein phosphatase activity
    		•  6.45938850813828 bayes_pls_golite062009
  • phosphatase activity
    		•  6.05839828647676 bayes_pls_golite062009
  • phosphoric ester hydrolase activity
    		•  6.05508122107559 bayes_pls_golite062009
  • hydrolase activity, acting on ester bonds
    		•  5.46891274080274 bayes_pls_golite062009
  • protein serine/threonine phosphatase activity
    		•  4.55926485636214 bayes_pls_golite062009
  • hydrolase activity
    		•  4.19812575932308 bayes_pls_golite062009
  • catalytic activity
    		•  1.76896578956606 bayes_pls_golite062009
  • binding
    		•  0.105761960845815 bayes_pls_golite062009
  • calcium-dependent protein serine/threonine phosphatase activity
    		•  0.0863772620665402 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle