YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|37527807, gi\|...
Organism:	Photorhabdus luminescens subsp. laumondii TTO1
Length:	279 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|37527807, gi|....

Description	E-value	Query Range	Subject Range
gi\|229837348, gi... - gi\|229837348\|ref\|ZP_04457511.1\| 3',5'-cyclic-nucleotide phosphodiesterase [Yersinia pestis Pestoides... gi\|167470307 - gi\|167470307\|ref\|ZP_02335011.1\| cyclic 3',5'-adenosine monophosphate phosphodiesterase [Yersinia pes... gi\|167055852, gi... - gi\|167425089\|ref\|ZP_02316842.1\| Ser/Thr protein phosphatase family protein [Yersinia pestis biovar M... gi\|229842892, gi... - gi\|229842892\|ref\|ZP_04463044.1\| 3',5'-cyclic-nucleotide phosphodiesterase [Yersinia pestis biovar Or... gi\|167418820, gi... - gi\|167418820\|ref\|ZP_02310573.1\| Ser/Thr protein phosphatase family protein [Yersinia pestis biovar O... gi\|229840560, gi... - gi\|229840560\|ref\|ZP_04460719.1\| 3',5'-cyclic-nucleotide phosphodiesterase [Yersinia pestis biovar Or... gi\|229682226, gi... - gi\|229900887\|ref\|ZP_04516011.1\| 3',5'-cyclic-nucleotide phosphodiesterase [Yersinia pestis Nepal516]... gi\|25752532 - pir\|\|AE0082 3',5'-cyclic-nucleotide phosphodiesterase (EC 3.1.4.17) cpdA-type [similarity] - Yersini... gi\|218927859, gi... - gi\|218927859\|ref\|YP_002345734.1\| cyclic 3',5'-adenosine monophosphate phosphodiesterase [Yersinia pe... gi\|167399027, gi... - gi\|167399027\|ref\|ZP_02304551.1\| Ser/Thr protein phosphatase family protein [Yersinia pestis biovar A... gi\|45442744, gi\|... - gi\|45442744\|ref\|NP_994283.1\| cyclic 3',5'-adenosine monophosphate phosphodiesterase [Yersinia pestis... gi\|166206809, gi... - gi\|166212063\|ref\|ZP_02238098.1\| Ser/Thr protein phosphatase family protein [Yersinia pestis biovar A... gi\|166008829, gi... - gi\|166008829\|ref\|ZP_02229727.1\| Ser/Thr protein phosphatase family protein [Yersinia pestis biovar A... gi\|150260302, gi... - gi\|150260302\|ref\|ZP_01917030.1\| cyclic 3',5'-adenosine monophosphate phosphodiesterase [Yersinia pes... gi\|165923273, gi... - gi\|165925073\|ref\|ZP_02220905.1\| Ser/Thr protein phosphatase family protein [Yersinia pestis biovar O...	209.0	[0..1]	[279..1]

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Predicted Domain #1

Region A:
Residues: [1-279]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MESQFELPVV EGTTAKILQI TDTHLFASKE DTLLGINTYR SYQAVLDAIL KQNADIDLIV  60
   61 ATGDLVQDQS LEAYRHFADG IARLPAPCVW LPGNHDYQPA MVDALAAAGV SPSKQILVGK 120
  121 HWQLLMLDSQ VQGVPHGELS EYQLEWMKNC LDRHPERYAV ILLHHHPLPS GCTWLDQHSL 180
  181 RNSHILAQYL QSYSRVKAML CGHIHQEMDL DWNGIRMMAT PSTCLQFKPH CTNFMLDTVA 240
  241 PGWRYLELSV ADNGEFGLTT QVYRLASNEF CPDLDSDGY

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	32.045757
Match:	2hy1A
Description:	No description for 2hy1A was found.

Predicted functions:

Term	Confidence	Notes
phosphoprotein phosphatase activity	6.45938850813828	bayes_pls_golite062009
phosphatase activity	6.05839828647676	bayes_pls_golite062009
phosphoric ester hydrolase activity	6.05508122107559	bayes_pls_golite062009
hydrolase activity, acting on ester bonds	5.46891274080274	bayes_pls_golite062009
protein serine/threonine phosphatase activity	4.55926485636214	bayes_pls_golite062009
hydrolase activity	4.19812575932308	bayes_pls_golite062009
catalytic activity	1.76896578956606	bayes_pls_golite062009
binding	0.105761960845815	bayes_pls_golite062009
calcium-dependent protein serine/threonine phosphatase activity	0.0863772620665402	bayes_pls_golite062009

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits

Predicted functions: