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Protein Overview: gi|111074344, gi...

General Information:
Name(s) found: gi|42573283 [NCBI NR]
gi|222423470 [NCBI NR]
gi|21618211 [NCBI NR]
gi|18415120 [NCBI NR]
gi|111074344 [NCBI NR]
Description(s) found:
Found 15 descriptions.
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  • gi|42573283|ref|NP_974738.1| unknown protein [Arabidopsis thaliana] [NCBI NR]
  • gi|222423470|dbj|BAH19705.1| AT5G06180 [Arabidopsis thaliana] [NCBI NR]
  • gi|21618211|gb|AAM67261.1| unknown [Arabidopsis thaliana] [NCBI NR]
  • gi|18415120|ref|NP_568162.1| unknown protein [Arabidopsis thaliana] [NCBI NR]
  • gi|111074344|gb|ABH04545.1| At5g06180 [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 404 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: biological_process [ND]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRRTQPRELA VTGLSENLQG CVFRTVKRAV LIGNGCAGAE NQCIGLLRSL GLFDRHLYYR  60
   61 VAKPRGGILQ WLPISLYKRI HRFISTICAG LSINATGITN VFEVDDAKQI AAMARKTFEK 120
  121 NGPLLVVASG SDTISVASSI RRLAMENVFV VQVQHPRSHL ERFDLVITPQ HDYFSLTPEG 180
  181 KRQIPFFLRP WVTPREHPGR NVFLTTGALH YADASTLRNA TSEWKNEFAS LPKPLVVVNI 240
  241 GGPTRNCLYG VDLAKQLCGM LQSILWSCGS LRISFSRRTP KKVVEVITGE LSSNSKVYIW 300
  301 DGKDPNPHLG HLALANTFII TADSISMLSE ACSTGKPVYV VGAERCTWKF SDFQKTLHGR 360
  361 GAVRPLTGKE DMCEKWSYSP LNDNVEAARR VIQDLAKRGW EIEA

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..404] FFAS03 1.15 Peptidoglycan biosynthesys glycosyltransferase MurG

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  1.66161133603889 bayes_pls_golite062009
  • transferase activity
    		•  0.682092739492777 bayes_pls_golite062009
  • transferase activity, transferring glycosyl groups
    		•  0.179384856325411 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.81

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle