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View Structure Prediction Details

Protein: gi|111074344, gi...
Organism: Arabidopsis thaliana
Length: 404 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|111074344, gi....

Description E-value Query
Range
Subject
Range
gi|9759316 - gi|9759316|dbj|BAB09683.1| unnamed protein product [Arabidopsis thaliana]
472.0 [0..1] [373..1]

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Predicted Domain #1
Region A:
Residues: [1-404]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRRTQPRELA VTGLSENLQG CVFRTVKRAV LIGNGCAGAE NQCIGLLRSL GLFDRHLYYR  60
   61 VAKPRGGILQ WLPISLYKRI HRFISTICAG LSINATGITN VFEVDDAKQI AAMARKTFEK 120
  121 NGPLLVVASG SDTISVASSI RRLAMENVFV VQVQHPRSHL ERFDLVITPQ HDYFSLTPEG 180
  181 KRQIPFFLRP WVTPREHPGR NVFLTTGALH YADASTLRNA TSEWKNEFAS LPKPLVVVNI 240
  241 GGPTRNCLYG VDLAKQLCGM LQSILWSCGS LRISFSRRTP KKVVEVITGE LSSNSKVYIW 300
  301 DGKDPNPHLG HLALANTFII TADSISMLSE ACSTGKPVYV VGAERCTWKF SDFQKTLHGR 360
  361 GAVRPLTGKE DMCEKWSYSP LNDNVEAARR VIQDLAKRGW EIEA

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.15
Match: 1f0kA
Description: Peptidoglycan biosynthesys glycosyltransferase MurG
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 1.66161133603889 bayes_pls_golite062009
transferase activity 0.682092739492777 bayes_pls_golite062009
transferase activity, transferring glycosyl groups 0.179384856325411 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle