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Protein Overview: gi|21928125, gi|...

General Information:
Name(s) found: gi|30680771 [NCBI NR]
gi|21928125 [NCBI NR]
Description(s) found:
Found 10 descriptions.
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  • gi|30680771|ref|NP_187522.2| mRNA capping enzyme family protein [Arabidopsis thaliana] [NCBI NR]
  • gi|21928125|gb|AAM78090.1| AT3g09100/MZB10_13 [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 471 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IEA]
    Biological Process: DNA repair [IEA]
    mRNA capping [IEA][ISS]
    DNA replication [IEA]
    protein amino acid dephosphorylation [IEA]
    DNA recombination [IEA]
    mRNA processing [IEA][ISS]
    dephosphorylation [IEA]
    Molecular Function: ATP binding [IEA]
    DNA ligase (ATP) activity [IEA]
    protein tyrosine phosphatase activity [IEA]
    phosphatase activity [IEA]
    mRNA guanylyltransferase activity [IEA][ISS]
    polynucleotide 5'-phosphatase activity [IEA]
    protein tyrosine/serine/threonine phosphatase activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVATMDLNAS PQPEEDDEPY VRHLEDYSSR DERIESAVEI ARREREERKK RMRYDKPTHN  60
   61 SQPVFRDQYY QNRNTKAYDR YKIPQGWLDC PPSGNEIGFL VPSKVPLNES YNNHVPPGSR 120
  121 YSFKQVIHNQ RIAGRKLGLV IDLTNTTRYY STTDLKKEGI KHVKIACKGR DAVPDNVSVN 180
  181 AFVNEVNQFV LNLKHSKKYI LVHCTHGHNR TGFMIVHYLM RSGPMNVTQA LKIFSDARPP 240
  241 GIYKPDYIDA LYSFYHEIKP ESVICPSTPE WKRSTELDLN GEALPDDEDD DGGPAGPVQG 300
  301 FQEESHQVDV KMSNDDVLGD EIPPDQEEGY RQFFYRMLSL NIGGRGCSQF PGSHPVSLNR 360
  361 ENLQLLRQRY YYATWKADGT RYMMLLTTDG CYIVDRSFRF RRVQMRFPFR HPTEGISDKV 420
  421 HHFTLLDGEM IIDTLPDKQK QERRYLIYDM VAINGQSVVE VGIVIIYLCN Q

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..287] PSI-BLAST 25.0 CRYSTAL STRUCTURE OF THE HUMAN RNA guanylyltransferase and 5'- phosphatase
    2 View Details [288..471] PSI-BLAST 20.39794 Crystal Structure of Human DNA Ligase I bound to 5'-adenylated, nicked DNA

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • catalytic activity
    		•  0.735352182450617 bayes_pls_golite062009
  • binding
    		•  0.0726189456624661 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.91

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle