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Protein Overview: APG3_ARATH

General Information:
Name(s) found: APG3_ARATH [Swiss-Prot]
Description(s) found:
Found 13 descriptions.
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  • Peptide chain release factor APG3, chloroplastic OS=Arabidopsis thaliana GN=APG3 PE=2 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 422 amino acids

    Gene Ontology:
    Cellular Component: chloroplast [IEA]
    cytoplasm [IEA]
    Biological Process: translational termination [ISS]
    chloroplast organization [NAS]
    Molecular Function: translation release factor activity [IEA][ISS]
    translation release factor activity, codon specific [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNSSMTTSPT ARAFLHLHSS PFTLRSRKSP SGVCLVSWPP SRSRRTRRLV CMAEPYLIRK  60
   61 MESVEKTWKE LSVKLADPDV VSNQSEYQKL AQSMSELDEV VTVFRRFKDC EKQLLESKVL 120
  121 AKEAGDDEDM AEMIGSEINS LTKEIEELEK QLKVLLLPSD PLDARNILLE VRAGTGGDEA 180
  181 AIWTGDLVRM YQRYSERSSW KFSMVSCSEA EHGGYKTCVM EIKGNRVYSK LKYESGVHRV 240
  241 QRVPQTETQG RVHTSTATVA IMPEADEVEV VIDPKDIELT SARSGGAGGQ NVNKVETAID 300
  301 LFHKPSGIRI FCTEERTQIR NKARAFQLLR AKLYEIKVRE QQEKIRNERK SQVGTGARSE 360
  361 KIRTYNYKDS RVTDHRLKMN FALTTFLDGA LEDAVQACAA LEQKELMEEL SESVAASSAT 420
  421 SG

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..422] PSI-BLAST 116.0 Molecular basis for bacterial class 1 release factor methylation by PrmC

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • translation release factor activity
    		•  8.49824253851587 bayes_pls_golite062009
  • translation termination factor activity
    		•  8.4944923601206 bayes_pls_golite062009
  • translation regulator activity
    		•  5.08132283479856 bayes_pls_golite062009
  • translation factor activity, nucleic acid binding
    		•  5.06589285641735 bayes_pls_golite062009
  • nucleic acid binding
    		•  4.35723700591238 bayes_pls_golite062009
  • binding
    		•  3.84101343221316 bayes_pls_golite062009
  • translation release factor activity, codon specific
    		•  0.183484956864194 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
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