| Protein: | APG3_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 422 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for APG3_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
440.0 | [0..52] | [414..1] |
|
Region A: Residues: [1-422] |
1 11 21 31 41 51
| | | | | |
1 MNSSMTTSPT ARAFLHLHSS PFTLRSRKSP SGVCLVSWPP SRSRRTRRLV CMAEPYLIRK 60
61 MESVEKTWKE LSVKLADPDV VSNQSEYQKL AQSMSELDEV VTVFRRFKDC EKQLLESKVL 120
121 AKEAGDDEDM AEMIGSEINS LTKEIEELEK QLKVLLLPSD PLDARNILLE VRAGTGGDEA 180
181 AIWTGDLVRM YQRYSERSSW KFSMVSCSEA EHGGYKTCVM EIKGNRVYSK LKYESGVHRV 240
241 QRVPQTETQG RVHTSTATVA IMPEADEVEV VIDPKDIELT SARSGGAGGQ NVNKVETAID 300
301 LFHKPSGIRI FCTEERTQIR NKARAFQLLR AKLYEIKVRE QQEKIRNERK SQVGTGARSE 360
361 KIRTYNYKDS RVTDHRLKMN FALTTFLDGA LEDAVQACAA LEQKELMEEL SESVAASSAT 420
421 SG
|
| Detection Method: |  |
| Confidence: | 116.0 |
| Match: | 2b3tB |
| Description: | Molecular basis for bacterial class 1 release factor methylation by PrmC |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| translation release factor activity | 8.49824253851587 | bayes_pls_golite062009 |
| translation termination factor activity | 8.4944923601206 | bayes_pls_golite062009 |
| translation regulator activity | 5.08132283479856 | bayes_pls_golite062009 |
| translation factor activity, nucleic acid binding | 5.06589285641735 | bayes_pls_golite062009 |
| nucleic acid binding | 4.35723700591238 | bayes_pls_golite062009 |
| binding | 3.84101343221316 | bayes_pls_golite062009 |
| translation release factor activity, codon specific | 0.183484956864194 | bayes_pls_golite062009 |
