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Protein Overview: APM1_ARATH

General Information:
Name(s) found: APM1_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|29028734|gb|AAO64746.1| At4g33090/F4I10_20 [Arabidopsis thaliana] [NCBI NR]
  • gi|24209879|gb|AAN41401.1| aminopeptidase M [Arabidopsis thaliana] [NCBI NR]
  • gi|22329112|ref|NP_195035.2| APM1 (AMINOPEPTIDASE M1); aminopeptidase [Arabidopsis thaliana] [NCBI NR]
  • gi|17473511|gb|AAL38379.1| AT4g33090/F4I10_20 [Arabidopsis thaliana] [NCBI NR]
  • gi|110742477|dbj|BAE99157.1| aminopeptidase like protein [Arabidopsis thaliana] [NCBI NR]
  • Aminopeptidase M1 OS=Arabidopsis thaliana GN=APM1 PE=1 SV=1 [Swiss-Prot]
  • At4g33090/F4I10_20 [Arabidopsis thaliana]gi|24209879|gb|AAN41401.1| aminopeptidase M [Arabidopsis thaliana]gi|17473511|gb|AAL38379.1| AT4g33090/F4I10_20 [Arabidopsis thaliana]gi|22329112|ref|NP_195035.2| aminopeptidase M [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Aminopeptidase M [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: APM1, ATAPM1 | APM1 (AMINOPEPTIDASE M1) | chr4:15965918-15970421 REVERSE [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • aminopeptidase M [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • aminopeptidase like protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • At4g33090/F4I10_20 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • AT4g33090/F4I10_20 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • APM1 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: APM1, ATAPM1 | aminopeptidase M1 | chr4:15965915-15970418 REVERSE LENGTH=879 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • AT4g33090/F4I10_20 OS=Arabidopsis thaliana GN=APM1 PE=2 SV=1 [ARATH-contam.fasta]
    • Organism: Arabidopsis thaliana
    Length: 879 amino acids

    Gene Ontology:
    Cellular Component: plasma membrane [IDA]
    Biological Process: auxin polar transport [TAS]
    Molecular Function: aminopeptidase activity [IDA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDQFKGEPRL PKFAVPKRYD LRLNPDLIAC TFTGTVAIDL DIVADTRFIV LNAADLSVND  60
   61 ASVSFTPPSS SKALAAPKVV LFEEDEILVL EFGEILPHGV GVLKLGFNGV LNDKMKGFYR 120
  121 STYEHNGEKK NMAVTQFEPA DARRCFPCWD EPACKATFKI TLEVPTDLVA LSNMPIMEEK 180
  181 VNGNLKIVSY QESPIMSTYL VAIVVGLFDY VEDHTSDGIK VRVYCQVGKA DQGKFALHVG 240
  241 AKTLDLFKEY FAVPYPLPKM DMIAIPDFAA GAMENYGLVT YRETALLYDE QHSAASNKQR 300
  301 VATVVAHELA HQWFGNLVTM EWWTHLWLNE GFATWVSYLA TDSLFPEWKI WTQFLDESTE 360
  361 GLRLDGLEES HPIEVEVNHA AEIDEIFDAI SYRKGASVIR MLQSYLGAEV FQKSLAAYIK 420
  421 NHAYSNAKTE DLWAALEAGS GEPVNKLMSS WTKQKGYPVV SAKIKDGKLE LEQSRFLSSG 480
  481 SPGEGQWIVP VTLCCGSYEK RKNFLLESKS GAYDLKELLG CSIADGSDKI NGTCSWIKIN 540
  541 VDQAGFYRVK YDDSLAAGLR NATESQSLTS IDRYGILDDS FALTMARQQS LASLLTLCSA 600
  601 YKKELDYTVL SNLIAISYKV VKIGADANQE LMSGIKHFFI GVFQFAAGKL GWDPKQGESH 660
  661 LDAMLRGEVL TALAVFGHDE TLKEAVRRFD AFLADRNTPL LPPDIRRAAY VAVMQRANKS 720
  721 DKSGYESLLR VYRETDLSQE KTRILGSLAS CPDPTIVQDV LNFVLSDEVR NQDALYGLSG 780
  781 VSWEGREVAW KWLQEKWEYI GNTWGSGFLI TRFISAVVSP FASFEKAKEV EEFFATRSKP 840
  841 SMARTLKQSI ERVHINANWV ESIKKEDNLT QLVAQLSSN

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..879] PSI-BLAST 130.0 Crystal structures of the tricorn interacting facor F3 from Thermoplasma acidophilum, a zinc aminopeptidase in three different conformations


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.94

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle