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Protein Overview: HDA14_ARATH

General Information:
Name(s) found: HDA14_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|75249520|sp|Q941D6.1|HDA14_ARATH RecName: Full=Histone deacetylase 14 [NCBI NR]
  • gi|21360523|gb|AAM47377.1| AT4g33470/F17M5_230 [Arabidopsis thaliana] [NCBI NR]
  • gi|18418220|ref|NP_567921.1| hda14 (histone deacetylase 14); histone deacetylase [Arabidopsis thaliana] [NCBI NR]
  • gi|15529220|gb|AAK97704.1| AT4g33470/F17M5_230 [Arabidopsis thaliana] [NCBI NR]
  • Histone deacetylase 14 OS=Arabidopsis thaliana GN=HDA14 PE=2 SV=1 [Swiss-Prot]
  • AT4g33470/F17M5_230 [Arabidopsis thaliana]gi|15529220|gb|AAK97704.1| AT4g33470/F17M5_230 [Arabidopsis thaliana]gi|18418220|ref|NP_567921.1| histone deacetylase family protein [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Histone deacetylase family protein [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: HDA14 | HDA14 (histone deacetylase 14); histone deacetylase | chr4:16102777-16105442 REVERSE [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • AT4g33470/F17M5_230 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • histone deacetylase [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: hda14, ATHDA14 | histone deacetylase 14 | chr4:16102774-16105439 REVERSE LENGTH=423 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
    • Organism: Arabidopsis thaliana
    Length: 423 amino acids

    Gene Ontology:
    Cellular Component: chloroplast [IDA]
    Biological Process: histone deacetylation [ISS]
    Molecular Function: histone deacetylase activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSMALIVRPF FVPGSAGISG SRNICKKNQW RKYLLKPSGS SINCSFSTEK NPLLPSIQQL  60
   61 ADARLIYSVS AALGHNKESH PECSARVPAI VNALEMNELT PKFRGSQILE LANFKTATVE 120
  121 DIANVHDKAY VFGLEKAMDE ASDSGLIFIE GSGPTYATST TFQDSLIAAG AGMALVDSVI 180
  181 AASRNSVDPP IGFALIRPPG HHAVPKGPMG FCVFGNVAIA ARHAQRTHGL KRIFIIDFDV 240
  241 HHGNGTNDAF TEDPDIFFLS THQDGSYPGT GKISDIGKGK GEGTTLNLPL PGGSGDIAMR 300
  301 TVFEEIIVPC AQRFKPDIIL VSAGYDAHVL DPLANLQFTT ATYYSLAKDI KRLAKEVCGG 360
  361 RCVFFLEGGY NLESLSSSVA DSFRALLGED SLASEFDNPA YLYDEPMRKV RDAIQRAKSI 420
  421 HCL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..423] PSI-BLAST 90.0 No description for 2nvrA was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.61

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle