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View Structure Prediction Details

Protein: HDA14_ARATH
Organism: Arabidopsis thaliana
Length: 423 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for HDA14_ARATH.

Description E-value Query
Range
Subject
Range
gi|2827430 - gi|2827430|gb|AAB99850.1| histone deacetylase 1 [Gallus gallus]
406.0 [0..60] [419..8]

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Predicted Domain #1
Region A:
Residues: [1-423]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSMALIVRPF FVPGSAGISG SRNICKKNQW RKYLLKPSGS SINCSFSTEK NPLLPSIQQL  60
   61 ADARLIYSVS AALGHNKESH PECSARVPAI VNALEMNELT PKFRGSQILE LANFKTATVE 120
  121 DIANVHDKAY VFGLEKAMDE ASDSGLIFIE GSGPTYATST TFQDSLIAAG AGMALVDSVI 180
  181 AASRNSVDPP IGFALIRPPG HHAVPKGPMG FCVFGNVAIA ARHAQRTHGL KRIFIIDFDV 240
  241 HHGNGTNDAF TEDPDIFFLS THQDGSYPGT GKISDIGKGK GEGTTLNLPL PGGSGDIAMR 300
  301 TVFEEIIVPC AQRFKPDIIL VSAGYDAHVL DPLANLQFTT ATYYSLAKDI KRLAKEVCGG 360
  361 RCVFFLEGGY NLESLSSSVA DSFRALLGED SLASEFDNPA YLYDEPMRKV RDAIQRAKSI 420
  421 HCL

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Detection Method: PSI-BLAST
Confidence: 90.0
Match: 2nvrA
Description: No description for 2nvrA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle