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Protein Overview: gi|15230899, gi|...

General Information:
Name(s) found: gi|28827394 [NCBI NR]
gi|28393068 [NCBI NR]
gi|15230899 [NCBI NR]
Description(s) found:
Found 9 descriptions.
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  • gi|28827394|gb|AAO50541.1| unknown protein [Arabidopsis thaliana] [NCBI NR]
  • gi|28393068|gb|AAO41968.1| unknown protein [Arabidopsis thaliana] [NCBI NR]
  • gi|15230899|ref|NP_188597.1| radical SAM domain-containing protein [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 372 amino acids

    Gene Ontology:
    Cellular Component: cytoplasm [IEA]
    Biological Process: rRNA processing [IEA]
    Molecular Function: RNA methyltransferase activity [IEA]
    catalytic activity [IEA]
    iron-sulfur cluster binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKLKSVFDAS EIKSEFESAG INPKFAIQIW KYVIQNPDCV WDEIPSLPSA AYSLLHSKFK  60
   61 TLTSSLHSLF HSSDGTTSKL LIKLQNGAFV EAVVMRYDTR LGMLGGKPRP GGIRSTLCIS 120
  121 SQVGCKMGCT FCATGTMGFK SNLTSGEIVE QLVHASRIAD IRNIVFMGMG EPLNNYNAVV 180
  181 EAVRVMLNQP FQLSPKRITI STVGIVHAIN KLHNDLPGVS LAVSLHAPVQ EIRCQIMPAA 240
  241 RAFPLQKLMD ALQTFQKNSQ QKIFIEYIML DGVNDQEQHA HLLGELLKTF QVVINLIPFN 300
  301 PIGSTSQFET SSIQGVSRFQ KILRETYKIR TTIRKEMGQD ISGACGQLVV NQPDIKKTPG 360
  361 TVELRDIEDL LL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..372] PSI-BLAST 39.221849 2.1 Angstrom X-ray crystal structure of lysine-2,3-aminomutase from Clostridium subterminale SB4, with Michaelis analog (L-alpha-lysine external aldimine form of pyridoxal-5'-phosphate).


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle