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View Structure Prediction Details

Protein: gi|15230899, gi|...
Organism: Arabidopsis thaliana
Length: 372 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|15230899, gi|....

Description E-value Query
Range
Subject
Range
RLMN_PSEPF - Dual-specificity RNA methyltransferase RlmN OS=Pseudomonas fluorescens (strain Pf0-1) GN=rlmN PE=3 S...
299.0 [0..2] [368..8]

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Predicted Domain #1
Region A:
Residues: [1-372]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKLKSVFDAS EIKSEFESAG INPKFAIQIW KYVIQNPDCV WDEIPSLPSA AYSLLHSKFK  60
   61 TLTSSLHSLF HSSDGTTSKL LIKLQNGAFV EAVVMRYDTR LGMLGGKPRP GGIRSTLCIS 120
  121 SQVGCKMGCT FCATGTMGFK SNLTSGEIVE QLVHASRIAD IRNIVFMGMG EPLNNYNAVV 180
  181 EAVRVMLNQP FQLSPKRITI STVGIVHAIN KLHNDLPGVS LAVSLHAPVQ EIRCQIMPAA 240
  241 RAFPLQKLMD ALQTFQKNSQ QKIFIEYIML DGVNDQEQHA HLLGELLKTF QVVINLIPFN 300
  301 PIGSTSQFET SSIQGVSRFQ KILRETYKIR TTIRKEMGQD ISGACGQLVV NQPDIKKTPG 360
  361 TVELRDIEDL LL

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Detection Method: PSI-BLAST
Confidence: 39.221849
Match: 2a5hA
Description: 2.1 Angstrom X-ray crystal structure of lysine-2,3-aminomutase from Clostridium subterminale SB4, with Michaelis analog (L-alpha-lysine external aldimine form of pyridoxal-5'-phosphate).
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle