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Protein Overview: SMU1_ARATH

General Information:
Name(s) found: SMU1_ARATH [Swiss-Prot]
Description(s) found:
Found 10 descriptions.
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  • Suppressor of mec-8 and unc-52 protein homolog 1 OS=Arabidopsis thaliana GN=SMU1 PE=1 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 511 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDA]
    CUL4 RING ubiquitin ligase complex [ISS]
    Biological Process: RNA splicing [IMP]
    Molecular Function: nucleotide binding [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MALEIEARDV IKIMLQFCKE NSLNQTFQTL QSECQVSLNT VDSVETFISD INSGRWDSVL  60
   61 PQVSQLKLPR NKLEDLYEQI VLEMIELREL DTARAILRQT QVMGVMKQEQ AERYLRMEHL 120
  121 LVRSYFDPHE AYGDSTKERK RAQIAQAVAA EVTVVPPSRL MALIGQALKW QQHQGLLPPG 180
  181 TQFDLFRGTA AMKQDVEDTH PNVLTHTIKF GKKSHAECAR FSPDGQFLAS SSVDGFIEVW 240
  241 DYISGKLKKD LQYQADESFM MHDDPVLCID FSRDSEMLAS GSQDGKIKIW RIRTGVCIRR 300
  301 FDAHSQGVTS LSFSRDGSQL LSTSFDQTAR IHGLKSGKLL KEFRGHTSYV NHAIFTSDGS 360
  361 RIITASSDCT VKVWDSKTTD CLQTFKPPPP LRGTDASVNS IHLFPKNTEH IVVCNKTSSI 420
  421 YIMTLQGQVV KSFSSGNREG GDFVAACVST KGDWIYCIGE DKKLYCFNYQ SGGLEHFMMV 480
  481 HEKDVIGITH HPHRNLLATY SEDCTMKLWK P

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..126] PSI-BLAST 10.522879 N-terminal domain of Lissencephaly-1 protein (Lis-1)
    2 View Details [127..201] deduced N/A No confident structure predictions are available.
    3 View Details [202..511] PSI-BLAST 84.69897 No description for 2gnqA was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle