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Protein Overview: DRP1E_ARATH

General Information:
Name(s) found: DRP1E_ARATH [Swiss-Prot]
Description(s) found:
Found 13 descriptions.
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  • Dynamin-related protein 1E OS=Arabidopsis thaliana GN=DRP1E PE=1 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 624 amino acids

    Gene Ontology:
    Cellular Component: mitochondrion [IDA]
    vacuole [IDA]
    plasma membrane [IDA]
    Biological Process: vesicle-mediated transport [ISS]
    response to cadmium ion [IEP]
    defense response to fungus [IMP]
    Molecular Function: GTP binding [IEA][ISS]
    GTPase activity [IEA][ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTTMESLIGL VNRIQRACTV LGDYGGGTGS NAFNSLWEAL PTVAVVGGQS SGKSSVLESI  60
   61 VGRDFLPRGS GIVTRRPLVL QLHKTDDGTE EYAEFLHLPK KQFTDFALVR REIQDETDRI 120
  121 TGKNKQISPV PIHLSIYSPN VVNLTLIDLP GLTKVAVEGQ PETIAEDIES MVRTYVDKPN 180
  181 CIILAISPAN QDIATSDAIK LAKDVDPTGE RTFGVLTKLD LMDKGTNALE VLEGRSYRLQ 240
  241 HPWVGIVNRS QADINKNVDM MLARRKEREY FDTSPDYGHL ASKMGSEYLA KLLSKHLESV 300
  301 IRTRIPSILS LINKSIEELE RELDRMGRPV AVDAGAQLYT ILEMCRAFDK IFKEHLDGGR 360
  361 PGGDRIYGVF DNQLPAALKK LPFDRHLSLQ SVKKIVSEAD GYQPHLIAPE QGYRRLIEGA 420
  421 LGYFRGPAEA SVDAVHYVLK ELVRKSISET EELKRFPSLQ VELAAAANSS LEKFREESKK 480
  481 SVIRLVDMES AYLTAEFFRK LPQEIERPVT NSKNQTASPS SATLDQYGDG HFRRIASNVS 540
  541 AYVNMVSDTL RNTIPKACVY CQVRQAKLAL LNYFYSQISK REGKQLGQLL DEDPALMDRR 600
  601 LECAKRLELY KKARDEIDAV AWVR

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..330] PSI-BLAST 89.045757 Structure of the nucleotide-free myosin II motor domain from Dictyostelium discoideum fused to the GTPase domain of dynamin 1 from Rattus norvegicus
    2 View Details [331..518] Pfam 10.318759 No description for PF01031.11 was found. No confident structure predictions are available.
    3 View Details [519..624] Pfam 35.431798 No description for PF02212.9 was found. Confident ab initio structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle