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Protein Overview: TPS01_ARATH

General Information:
Name(s) found: TPS01_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|30683433|ref|NP_193322.2| ATTS1; lyase/ magnesium ion binding [Arabidopsis thaliana] [NCBI NR]
  • gi|2326369|emb|CAA72074.1| Terpene synthase, TS1 [Arabidopsis thaliana] [NCBI NR]
  • Terpenoid synthase 1 OS=Arabidopsis thaliana GN=TPS01 PE=2 SV=1 [Swiss-Prot]
  • Terpene synthase, TS1 [Arabidopsis thaliana]gi|30683433|ref|NP_193322.2| terpene synthase/cyclase family protein [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • | Symbols: ATTS1 | ATTS1 (Arabidopsis thaliana terpene synthase 1); lyase/ magnesium ion binding | chr4:9008387-9010962 REVERSE [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • Terpene synthase, TS1 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • ATTS1; lyase [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: ATTS1, TS1 | terpene synthase 1 | chr4:9008372-9010947 REVERSE LENGTH=598 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
    • Organism: Arabidopsis thaliana
    Length: 598 amino acids

    Gene Ontology:
    Cellular Component: chloroplast [IEA]
    Biological Process: terpene biosynthetic process [ISS]
    Molecular Function: magnesium ion binding [IEA]
    lyase activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYSISLVVNM QCISAYGSIL SLPLRSNLFS VRKLSSFPHK SFSGQHGKLV RMKATPTRAC  60
   61 HDQESNRKFK RLPLSKWGHH FLSAQVDVSE MNALAQEIER LKPEVGEMLM FSSKSIESTK 120
  121 KRILFIYMLV SLGVAFHFED EIEQSLEEGF EKIQEMIAGE DDLYTISIMF WVFRTYGYNM 180
  181 STDVFKRFKG ENEKFMESIT SDVKGMVSLY EAAHLRTTRE DILEEALSFT TRNLESLARA 240
  241 GASSPHILMR IRNALCMPQH YNAEMIFARE YISFYEQEED HNKMLLRFAK INFKFLQLNW 300
  301 IQELKTLTKW WKQQDLASKL PPYFRDRLIE CYLFAIMIYF EPQFSLGRVS LAKINTVFTL 360
  361 VDDTCDRYGN VSEVAALVQC VERWDPDCMD SLPDYMKTVF KFAWNTFEEC ENAGIMEEGL 420
  421 SYDVQGALEE WEQGDVVPTF DEYLEIGGVE VTMYVSIACS FLGLGQSSRE QAYKWLKSRP 480
  481 KFVEAQAKRA RLMNDIAGFE GDMSRGFDVN AIMYYMKQYK VTEEETFTRL QKMARDLDTT 540
  541 VNEEILKTTK SVPRQILKRA IDFGKMIEFT YRSGEEYTHP EGRFKDHITS LFVDLIRL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..598] PSI-BLAST 1000.0 5-EPI-ARISTOLOCHENE SYNTHASE FROM NICOTIANA TABACUM

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  1.87397377711135 bayes_pls_golite062009
  • transferase activity
    		•  1.34929557841705 bayes_pls_golite062009
  • transferase activity, transferring alkyl or aryl (other than methyl) groups
    		•  1.22586398285056 bayes_pls_golite062009
  • prenyltransferase activity
    		•  0.302854173865421 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle