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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: TPS01_ARATH
Protein type: Transmembrane
Type Confidence: 0.62
Topology Confidence: 0.50
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYSISLVVNM QCISAYGSIL SLPLRSNLFS VRKLSSFPHK SFSGQHGKLV RMKATPTRAC  60
   61 HDQESNRKFK RLPLSKWGHH FLSAQVDVSE MNALAQEIER LKPEVGEMLM FSSKSIESTK 120
  121 KRILFIYMLV SLGVAFHFED EIEQSLEEGF EKIQEMIAGE DDLYTISIMF WVFRTYGYNM 180
  181 STDVFKRFKG ENEKFMESIT SDVKGMVSLY EAAHLRTTRE DILEEALSFT TRNLESLARA 240
  241 GASSPHILMR IRNALCMPQH YNAEMIFARE YISFYEQEED HNKMLLRFAK INFKFLQLNW 300
  301 IQELKTLTKW WKQQDLASKL PPYFRDRLIE CYLFAIMIYF EPQFSLGRVS LAKINTVFTL 360
  361 VDDTCDRYGN VSEVAALVQC VERWDPDCMD SLPDYMKTVF KFAWNTFEEC ENAGIMEEGL 420
  421 SYDVQGALEE WEQGDVVPTF DEYLEIGGVE VTMYVSIACS FLGLGQSSRE QAYKWLKSRP 480
  481 KFVEAQAKRA RLMNDIAGFE GDMSRGFDVN AIMYYMKQYK VTEEETFTRL QKMARDLDTT 540
  541 VNEEILKTTK SVPRQILKRA IDFGKMIEFT YRSGEEYTHP EGRFKDHITS LFVDLIRL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle