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Protein Overview: SPO12_ARATH

General Information:
Name(s) found: SPO12_ARATH [Swiss-Prot]
Description(s) found:
Found 13 descriptions.
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  • Meiotic recombination protein SPO11-2 OS=Arabidopsis thaliana GN=SPO11-2 PE=1 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 383 amino acids

    Gene Ontology:
    Cellular Component: chromosome [IEA]
    Biological Process: chiasma assembly [IMP]
    pollen development [IMP]
    seed development [IMP]
    [NOT]floral organ development [IMP]
    DNA topological change [ISS]
    embryo sac development [IMP]
    DNA metabolic process [ISS]
    meiosis [IMP]
    meiotic DNA double-strand break formation [IGI]
    Molecular Function: ATP binding [IEA][ISS]
    DNA binding [IEA][ISS]
    catalytic activity [IEA]
    DNA topoisomerase (ATP-hydrolyzing) activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEESSGLSSM KFFSDQHLSY ADILLPHEAR ARIEVSVLNL LRILNSPDPA ISDLSLINRK  60
   61 RSNSCINKGI LTDVSYIFLS TSFTKSSLTN AKTAKAFVRV WKVMEICFQI LLQEKRVTQR 120
  121 ELFYKLLCDS PDYFSSQIEV NRSVQDVVAL LRCSRYSLGI MASSRGLVAG RLFLQEPGKE 180
  181 AVDCSACGSS GFAITGDLNL LDNTIMRTDA RYIIIVEKHA IFHRLVEDRV FNHIPCVFIT 240
  241 AKGYPDIATR FFLHRMSTTF PDLPILVLVD WNPAGLAILC TFKFGSIGMG LEAYRYACNV 300
  301 KWIGLRGDDL NLIPEESLVP LKPKDSQIAK SLLSSKILQE NYIEELSLMV QTGKRAEIEA 360
  361 LYCHGYNYLG KYIATKIVQG KYI

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..383] PSI-BLAST 88.69897 No description for 2q2eA was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.89

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle