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View Structure Prediction Details

Protein: SPO12_ARATH
Organism: Arabidopsis thaliana
Length: 383 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPO12_ARATH.

Description E-value Query
Range
Subject
Range
SPO12_ORYSJ - Meiotic recombination protein SPO11-2 OS=Oryza sativa subsp. japonica GN=SPO11-2 PE=2 SV=1
418.0 [0..1] [383..1]

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Predicted Domain #1
Region A:
Residues: [1-383]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEESSGLSSM KFFSDQHLSY ADILLPHEAR ARIEVSVLNL LRILNSPDPA ISDLSLINRK  60
   61 RSNSCINKGI LTDVSYIFLS TSFTKSSLTN AKTAKAFVRV WKVMEICFQI LLQEKRVTQR 120
  121 ELFYKLLCDS PDYFSSQIEV NRSVQDVVAL LRCSRYSLGI MASSRGLVAG RLFLQEPGKE 180
  181 AVDCSACGSS GFAITGDLNL LDNTIMRTDA RYIIIVEKHA IFHRLVEDRV FNHIPCVFIT 240
  241 AKGYPDIATR FFLHRMSTTF PDLPILVLVD WNPAGLAILC TFKFGSIGMG LEAYRYACNV 300
  301 KWIGLRGDDL NLIPEESLVP LKPKDSQIAK SLLSSKILQE NYIEELSLMV QTGKRAEIEA 360
  361 LYCHGYNYLG KYIATKIVQG KYI

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 88.69897
Match: 2q2eA
Description: No description for 2q2eA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle