YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: gi|20466169, gi|...

General Information:
Name(s) found: gi|30695448 [NCBI NR]
gi|20466169 [NCBI NR]
Description(s) found:
Found 10 descriptions.
SHOW ALL
  • gi|30695448|ref|NP_564623.2| sodium/calcium exchanger family protein / calcium-binding EF hand family protein [Arabidopsis thaliana] [NCBI NR]
  • gi|20466169|gb|AAM20402.1| unknown protein [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 585 amino acids

    Gene Ontology:
    Cellular Component: membrane [IDA][ISS]
    plant-type vacuole [IDA]
    vacuolar membrane [IDA]
    vacuole [IDA]
    plasma membrane [IDA]
    Biological Process: NONE FOUND
    Molecular Function: calcium ion binding [IEA][ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRFRSLISLL FLLFFTSSAY ARFVSLNPSS TSLISDGIDG GSNLAGSGSV IKSVVSAPAE  60
   61 EKEEACEQTY GFMPCTKTAL GNVFLILVYG FLMFTAATYL SAGSELLLEI LGPGIVGGLF 120
  121 LPMLGALPDA MLIMVSGLSG DAATAQSQVS VGMGLLAGST VMLLTVIWGT CTVVGKCDLR 180
  181 DSIAVNNQDT KGFHLKDSGV TVDIWTSYAA RIMAISVIPF VIVQLPQMLG STSGRQLSVL 240
  241 IALILSVLML ISYCVYQVFQ PWIQRRRLAF AKHKHVISGI LRHLKQHALG RLLDDEGQPD 300
  301 EHVIRKLFLT IDANNDGHLS AAELKALIIG ISFEDIDFDK DDAVGKVLQD FDKTLDEQVD 360
  361 QEEFVRGIKQ WLIQAMGGAP SGPEAGPRTM KFLDNFHVQT KREHALLGDN ENGENDEEGG 420
  421 EVADPKWITI KAALLLLLGA AIAAAFADPL VDTVNNFSAA TGIPSFFISF IALPLATNSS 480
  481 EAVSAIIFAS RKKIRTASLT FSELCGGVTM NNILCLSVFL AIVYVRGLTW NFSSEVLVIL 540
  541 IVCLVMGGFA SFRTTYPLWT CFIAYLLYPF SLGLVYILDY WFGWS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..113] deduced N/A No confident structure predictions are available.
    2 View Details [114..259] PSI-BLAST 3.221849 No description for 2jamA was found.
    3 View Details [260..442] PSI-BLAST 14.0 Regulatory apparatus of Calcium Dependent protein kinase from Arabidopsis thaliana
    4 View Details [443..585] MSA 184.332997 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle