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Protein Overview: gi|18396454, gi|...

General Information:
Name(s) found: gi|20466097 [NCBI NR]
gi|18396454 [NCBI NR]
gi|15450633 [NCBI NR]
Description(s) found:
Found 10 descriptions.
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  • gi|20466097|gb|AAM19970.1| At1g27700/T22C5_14 [Arabidopsis thaliana] [NCBI NR]
  • gi|18396454|ref|NP_564292.1| protein binding [Arabidopsis thaliana] [NCBI NR]
  • gi|15450633|gb|AAK96588.1| At1g27700/T22C5_14 [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 297 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDA]
    Biological Process: vesicle-mediated transport [IEA]
    Golgi vesicle transport [IEA]
    Molecular Function: protein binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTTSLDRWEK DPFFPAAEEV QESADRMESA YRTWLNGKRD SSKVWDSEQL HRDLHAALGT  60
   61 TKWQLDEFQK AVKSSYDNRL SDETRDRHRE FTFVMEAQVS KIEKSLKEAA QSDGKGTPRW 120
  121 VRLDEDDRNE LALFLTGPSE SAKANPNGHR RTASAAEFSA WNIAVSDDGL VKKSCDEPVV 180
  181 RPPRKVPSFS GFLNYMDPVS KHCNRKWKGL DRQGDSDAAL LPIQANQQDM NGCSERGKSC 240
  241 MECEEDCYEK QLHGWYGALQ RQLQRSQYRM RYSKSVHAAI WIILLVFLIV VVAVHSM

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..140] PSI-BLAST 29.30103 Syntaxin 6, SNAP-25 homolog
    2 View Details [141..297] MSA 1.006993 View MSA. No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  0.068037611730119 bayes_pls_golite062009
    2 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle