YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|18396454, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.68
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTTSLDRWEK DPFFPAAEEV QESADRMESA YRTWLNGKRD SSKVWDSEQL HRDLHAALGT  60
   61 TKWQLDEFQK AVKSSYDNRL SDETRDRHRE FTFVMEAQVS KIEKSLKEAA QSDGKGTPRW 120
  121 VRLDEDDRNE LALFLTGPSE SAKANPNGHR RTASAAEFSA WNIAVSDDGL VKKSCDEPVV 180
  181 RPPRKVPSFS GFLNYMDPVS KHCNRKWKGL DRQGDSDAAL LPIQANQQDM NGCSERGKSC 240
  241 MECEEDCYEK QLHGWYGALQ RQLQRSQYRM RYSKSVHAAI WIILLVFLIV VVAVHSM

Type	Start	End	Confidence
Cytoplasmic	1	274	0.80
Transmembrane Helix	275	295	0.93
Non-Cytoplasmic	296	297	0.68