| Protein: | gi|18396454, gi|... |
| Organism: | Arabidopsis thaliana |
| Length: | 297 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|18396454, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
373.0 | [0..1] | [277..1] |
|
Region A: Residues: [1-140] |
1 11 21 31 41 51
| | | | | |
1 MTTSLDRWEK DPFFPAAEEV QESADRMESA YRTWLNGKRD SSKVWDSEQL HRDLHAALGT 60
61 TKWQLDEFQK AVKSSYDNRL SDETRDRHRE FTFVMEAQVS KIEKSLKEAA QSDGKGTPRW 120
121 VRLDEDDRNE LALFLTGPSE
|
| Detection Method: |  |
| Confidence: | 29.30103 |
| Match: | 1lvfA |
| Description: | Syntaxin 6, SNAP-25 homolog |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.068037611730119 | bayes_pls_golite062009 |
|
Region A: Residues: [141-297] |
1 11 21 31 41 51
| | | | | |
1 SAKANPNGHR RTASAAEFSA WNIAVSDDGL VKKSCDEPVV RPPRKVPSFS GFLNYMDPVS 60
61 KHCNRKWKGL DRQGDSDAAL LPIQANQQDM NGCSERGKSC MECEEDCYEK QLHGWYGALQ 120
121 RQLQRSQYRM RYSKSVHAAI WIILLVFLIV VVAVHSM
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
