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Protein Overview: IVD_ARATH

General Information:
Name(s) found: IVD_ARATH [Swiss-Prot]
Description(s) found:
Found 15 descriptions.
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  • Isovaleryl-CoA dehydrogenase, mitochondrial OS=Arabidopsis thaliana GN=IVD PE=1 SV=2 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 409 amino acids

    Gene Ontology:
    Cellular Component: mitochondrial matrix [IDA]
    mitochondrion [IDA]
    Biological Process: NONE FOUND
    Molecular Function: isovaleryl-CoA dehydrogenase activity [IDA][ISS]
    ATP binding [IDA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQRFFSARSI LGYAVKTRRR SFSSRSSSLL FDDTQLQFKE SVSKFAQDNI APHAERIDKT  60
   61 NSFPKDVNLW KLMGEFNLHG ITAPEEYGGL GLGYLYHCIA MEEISRASGS VALSYGAHSN 120
  121 LCINQLVRNG TAAQKEKYLP KLISGEHVGA LAMSEPNAGS DVVGMKCKAE KVDGGYILNG 180
  181 NKMWCTNGPS AETLVVYAKT DTKAGSKGIT AFIIEKGMTG FSTAQKLDKL GMRGSDTCEL 240
  241 VFENCFVPEE NILDKEGKGV YVLMSGLDLE RLVLAAGPLG IMQACLDNVL PYIRQREQFG 300
  301 RPVGEFQFIQ GKVADMYTAL QSSRSYVYSV ARDCDNGKVD PKDCAGTILC AAERATQVAL 360
  361 QAIQCLGGNG YINEYATGRL LRDAKLYEIG AGTSEIRRIV IGRELFKEE

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..409] PSI-BLAST 121.0 Isovaleryl-CoA dehydrogenase, C-domain; Isovaleryl-coa dehydrogenase, NM domains

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • acyl-CoA oxidase activity
    		•  7.01556556997719 bayes_pls_golite062009
  • oxidoreductase activity, acting on the CH-CH group of donors
    		•  6.78589465598787 bayes_pls_golite062009
  • general RNA polymerase II transcription factor activity
    		•  5.78129971677842 bayes_pls_golite062009
  • acyl-CoA dehydrogenase activity
    		•  5.1762698535957 bayes_pls_golite062009
  • isovaleryl-CoA dehydrogenase activity
    		•  4.66102768687662 bayes_pls_golite062009
  • oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor
    		•  3.75267948370939 bayes_pls_golite062009
  • RNA polymerase II transcription mediator activity
    		•  3.58504058273727 bayes_pls_golite062009
  • oxidoreductase activity
    		•  2.88983847563931 bayes_pls_golite062009
  • transcription regulator activity
    		•  2.31681514717218 bayes_pls_golite062009
  • pristanoyl-CoA oxidase activity
    		•  2.26651221125135 bayes_pls_golite062009
  • binding
    		•  1.84962038137824 bayes_pls_golite062009
  • catalytic activity
    		•  1.79436687732784 bayes_pls_golite062009
  • palmitoyl-CoA oxidase activity
    		•  1.72613267428428 bayes_pls_golite062009
  • long-chain-acyl-CoA dehydrogenase activity
    		•  1.53039234278399 bayes_pls_golite062009
  • RNA polymerase II transcription factor activity
    		•  0.634990683062526 bayes_pls_golite062009
  • butyryl-CoA dehydrogenase activity
    		•  0.400090490265931 bayes_pls_golite062009
  • protein binding
    		•  0.0853302624128481 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.94

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle