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Protein Overview: gi|20334820, gi|...

General Information:
Name(s) found: gi|22329501 [NCBI NR]
gi|20334820 [NCBI NR]
Description(s) found:
Found 9 descriptions.
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  • gi|22329501|ref|NP_172669.2| fumarylacetoacetase, putative [Arabidopsis thaliana] [NCBI NR]
  • gi|20334820|gb|AAM16166.1| At1g12050/F12F1_8 [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 421 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: aromatic amino acid family metabolic process [IEA][ISS]
    metabolic process [IEA]
    Molecular Function: catalytic activity [IEA]
    fumarylacetoacetase activity [IEA][ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MALLKSFIDV GSDSHFPIQN LPYGVFKPES NSTPRPAVAI GDLVLDLSAI SEAGLFDGLI  60
   61 LKDADCFLQP NLNKFLAMGR PAWKEARSTL QRILSSNEPI LRDNDVLRRK SFHQMSKVEM 120
  121 IVPMVIGDYT DFFASMHHAK NCGLMFRGPE NAINPNWFRL PIAYHGRASS IVISGTDIIR 180
  181 PRGQGHPQGN SEPYFGPSKK LDFELEMAAV VGPGNELGKP IDVNNAADHI FGLLLMNDWS 240
  241 ARDIQAWEYV PLGPFLGKSF GTTISPWIVT LDALEPFGCQ APKQDPPPLP YLAEKESVNY 300
  301 DISLEVQLKP SGRDDSCVIT KSNFQNLYWT ITQQLAHHTV NGCNLRPGDL LGTGTISGPE 360
  361 PDSYGCLLEL TWNGQKPLSL NGTTQTFLED GDQVTFSGVC KGDGYNVGFG TCTGKIVPSP 420
  421 P

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..421] PSI-BLAST 130.0 Fumarylacetoacetate hydrolase, FAH, N-terminal domain; Fumarylacetoacetate hydrolase, FAH, C-terminal domain

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • hydrolase activity, acting on acid carbon-carbon bonds
    		•  3.91949440356496 bayes_pls_golite062009
  • hydrolase activity, acting on acid carbon-carbon bonds, in ketonic substances
    		•  3.81877470867258 bayes_pls_golite062009
  • fumarylacetoacetase activity
    		•  3.73784156823927 bayes_pls_golite062009
  • catalytic activity
    		•  1.43840931606572 bayes_pls_golite062009
  • binding
    		•  0.945020682808578 bayes_pls_golite062009
  • protein binding
    		•  0.211409325631147 bayes_pls_golite062009
  • hydrolase activity
    		•  0.00641900361184404 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle