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Protein Overview: SUGP1_ARATH

General Information:
Name(s) found: SUGP1_ARATH [Swiss-Prot]
Description(s) found:
Found 13 descriptions.
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  • SURP and G-patch domain-containing protein 1-like protein OS=Arabidopsis thaliana GN=At3g52120 PE=2 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 443 amino acids

    Gene Ontology:
    Cellular Component: intracellular [IEA][ISS]
    Biological Process: RNA processing [IEA][ISS]
    Molecular Function: nucleic acid binding [IEA][ISS]
    RNA binding [IEA][ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDKGAPPSIF VNDGSFMERF RQLQQEKDKD KDKVVQVEDS KPVKIISNPK PAANKISIGL  60
   61 KPNDAQKKGG KLAFSLKQKS KLLAPPVKLG TEEDEDDEDV KHEQGFGSVK RQKLEQRDTP 120
  121 VKSAKVSDVA PPPPSDPTVK KVADKLASFV AKHGRPFEHI TRQKNPGDTP FKFLFDENCA 180
  181 DYKYYVFRLA EEEKLISQTK DSGVLHSGDA GSRTSTAAIP LQKPAYQQTG YQIPASALYD 240
  241 TPVEPGASSR SAQASITRPS DSDSFSGPRG ADPLSMMEFY MKKAAQEEKM RRPRQSKDEM 300
  301 PPPASLQGPS ETSSTDPGKR GHHMGDYIPL EELDKFLSKC NDAAAQKATK EAAEKAKIQA 360
  361 DNVGHKLLSK MGWKEGEGIG SSRKGMADPI MAGDVKTNNL GVGASAPGEV KPEDDIYEQY 420
  421 KKRMMLGYKH RPNPLGNPRK AYY

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..131] MSA 1.152996 View MSA. No confident structure predictions are available.
    2 View Details [132..213] PSI-BLAST 5.39794 Solution structure of SURP domain in splicing factor 4
    3 View Details [214..293] deduced N/A No confident structure predictions are available.
    4 View Details [294..443] MSA 6.153995 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

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