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Protein Overview: gi|15982860, gi|...

General Information:
Name(s) found: gi|20334758 [NCBI NR]
gi|18413658 [NCBI NR]
gi|15982860 [NCBI NR]
Description(s) found:
Found 10 descriptions.
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  • gi|20334758|gb|AAM16240.1| AT4g11790/T5C23_220 [Arabidopsis thaliana] [NCBI NR]
  • gi|18413658|ref|NP_567381.1| Ran-binding protein 1 domain-containing protein / RanBP1 domain-containing protein [Arabidopsis thaliana] [NCBI NR]
  • gi|15982860|gb|AAL09777.1| AT4g11790/T5C23_220 [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 443 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: intracellular transport [IEA]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRGVKRAAIS ESNDSPFKNA KPVEGIFFGT QKNVVPMQQS SVTSASLDKQ RAELARKHVR  60
   61 ALNNQFVSWV QLQLKNHPDE LWEDGMNDYI THASNILEKF KDVVSWLKEN KGKGENLSPE 120
  121 SRGAENKLVA EVKNTNVKSF SNNIPFASNN QPGIFSNNQS SDFSSSQSGF FSSQSGAFSS 180
  181 SPSGLISNSQ TGSFSSGQFG TTKSSQPSLF SGSQAGAISN SQPGTFSSSH SGITSNSQTG 240
  241 SFSSGQFGQT KSSQPSLLSG SQAGAISSNQ PSFQFSNSQS PFTSAVPPVS IPAKQDHSDD 300
  301 ADGGDEQSQP SSPSVKKTEE KGITVVHEVK CKLYVKSSDP ADKGWKDKGT GNLYIKCKEG 360
  361 VDKGTKESKP TILVRNDVGK LLLNALLYAG MKTSPQKNAL VAIFHSSDDS NENVTPRTFL 420
  421 IRTKNAEARD NLATAIQEYA PSS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..193] MSA 7.162997 View MSA. No confident structure predictions are available.
    2 View Details [194..270] MSA 1.168996 View MSA. No confident structure predictions are available.
    3 View Details [271..443] PSI-BLAST 49.045757 Ran-binding protein 1, Ranbp1

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2 No functions predicted.
    3
    Term Confidence Notes
  • binding
    		•  0.597587183571285 bayes_pls_golite062009
  • protein binding
    		•  0.29116370406325 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle