| Protein: | gi|15982860, gi|... |
| Organism: | Arabidopsis thaliana |
| Length: | 443 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|15982860, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
281.0 | [0..11] | [440..769] |
|
Region A: Residues: [1-193] |
1 11 21 31 41 51
| | | | | |
1 MRGVKRAAIS ESNDSPFKNA KPVEGIFFGT QKNVVPMQQS SVTSASLDKQ RAELARKHVR 60
61 ALNNQFVSWV QLQLKNHPDE LWEDGMNDYI THASNILEKF KDVVSWLKEN KGKGENLSPE 120
121 SRGAENKLVA EVKNTNVKSF SNNIPFASNN QPGIFSNNQS SDFSSSQSGF FSSQSGAFSS 180
181 SPSGLISNSQ TGS
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [194-270] |
1 11 21 31 41 51
| | | | | |
1 FSSGQFGTTK SSQPSLFSGS QAGAISNSQP GTFSSSHSGI TSNSQTGSFS SGQFGQTKSS 60
61 QPSLLSGSQA GAISSNQ
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [271-443] |
1 11 21 31 41 51
| | | | | |
1 PSFQFSNSQS PFTSAVPPVS IPAKQDHSDD ADGGDEQSQP SSPSVKKTEE KGITVVHEVK 60
61 CKLYVKSSDP ADKGWKDKGT GNLYIKCKEG VDKGTKESKP TILVRNDVGK LLLNALLYAG 120
121 MKTSPQKNAL VAIFHSSDDS NENVTPRTFL IRTKNAEARD NLATAIQEYA PSS
|
| Detection Method: | |
| Confidence: | 49.045757 |
| Match: | 1k5dB |
| Description: | Ran-binding protein 1, Ranbp1 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.597587183571285 | bayes_pls_golite062009 |
| protein binding | 0.29116370406325 | bayes_pls_golite062009 |
