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Protein Overview: gi|20197401, gi|...

General Information:
Name(s) found: gi|7109715 [NCBI NR]
gi|20197591 [NCBI NR]
gi|20197401 [NCBI NR]
gi|18379216 [NCBI NR]
Description(s) found:
Found 13 descriptions.
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  • gi|7109715|gb|AAF36769.1| auxin transporter splice variant b [Arabidopsis thaliana] [NCBI NR]
  • gi|20197591|gb|AAM15143.1| putative auxin transport protein [Arabidopsis thaliana] [NCBI NR]
  • gi|20197401|gb|AAC67319.2| putative auxin transport protein [Arabidopsis thaliana] [NCBI NR]
  • gi|18379216|ref|NP_565261.1| PIN4 (PIN-FORMED 4); auxin:hydrogen symporter/ transporter [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 612 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MITWHDLYTV LTAVVPLYVA MILAYGSVQW WKIFSPDQCS GINRFVAIFA VPLLSFHFIS  60
   61 TNDPYAMNFR FVAADTLQKI IMLVLLALWA NLTKNGSLEW MITIFSLSTL PNTLVMGIPL 120
  121 LIAMYGTYAG SLMVQVVVLQ CIIWYTLLLF LFEYRGAKLL IMEQFPETGA SIVSFKVESD 180
  181 VVSLDGHDFL ETDAEIGNDG KLHVTVRKSN ASRRSLMMTP RPSNLTGAEI YSLSSTPRGS 240
  241 NFNHSDFYSV MGFPGGRLSN FGPADLYSVQ SSRGPTPRPS NFEENNAVKY GFYNNTNSSV 300
  301 PAAGSYPAPN PEFSTGTGVS TKPNKIPKEN QQQLQEKDSK ASHDAKELHM FVWSSSASPV 360
  361 SDVFGGGAGD NVATEQSEQG AKEIRMVVSD QPRKSGGDDI GGLDSGEGER EIEKATAGLN 420
  421 KMGSNSTAEL EAAGGDGGGN NGTHMPPTSV MTRLILIMVW RKLIRNPNTY SSLIGLIWAL 480
  481 VAYRWHVAMP KILQQSISIL SDAGLGMAMF SLGLFMALQP KIIACGNSVA TFAMAVRFIT 540
  541 GPAIMAVAGI AIGLHGDLLR IAIVQAALPQ GIVPFVFAKE YNVHPTILST GVIFGMLIAL 600
  601 PITLVYYILL GL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..252] MSA 195.220994 View MSA. No confident structure predictions are available.
    2 View Details [253..446] MSA 1.241973 View MSA. No confident structure predictions are available.
    3 View Details [447..612] MSA 192.475997 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle