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Protein Overview: gi|19699142, gi|...

General Information:
Name(s) found: gi|19699142 [NCBI NR]
gi|18418571 [NCBI NR]
gi|15146230 [NCBI NR]
Description(s) found:
Found 11 descriptions.
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  • gi|19699142|gb|AAL90937.1| AT4g35080/M4E13_135 [Arabidopsis thaliana] [NCBI NR]
  • gi|18418571|ref|NP_567976.1| high-affinity nickel-transport family protein [Arabidopsis thaliana] [NCBI NR]
  • gi|15146230|gb|AAK83598.1| AT4g35080/M4E13_135 [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 365 amino acids

    Gene Ontology:
    Cellular Component: chloroplast [IEA]
    integral to membrane [IEA][ISS]
    Biological Process: nickel ion transport [ISS]
    metal ion transport [IEA]
    Molecular Function: metal ion binding [IEA]
    nickel ion transmembrane transporter activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MERLLQPSSS SSSISPSKFP SRTSPFLPRL RSSGLSFVST HRPESRRVSS ISCNSSQIPS  60
   61 LYTPIGSNTT NNSFNGSPKS DESKPNPGFL TRIATSASEQ RKTLSTGTVI LISAVAVLLL 120
  121 NPLLAPPAFA SFQTAAKSGW LTSAWTGFLA GCLHTLSGPD HLAALAPLSI GRSKMESAAV 180
  181 GALWGCGHDA GQVIFGLLFL LLKDRLHIEV LQTWGTRIVG LTLVIIGAMG IKEASEIPEP 240
  241 CVALETDISM VSTEKEALPL PKKKKIGFAT FATGVVHGLQ PDALMIVLPA LALPSRLAGS 300
  301 AFLIMFLVGT VIAMGSYTAF IGSCSEALKE KVPRITEKLT WVSSLVAIGL GLGIVISPFF 360
  361 GFSLY

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..125] PSI-BLAST 12.154902 Structure characterization of the water soluble region of P-type ATPase CopA from Bacillus subtilis
    2 View Details [126..365] MSA 16.695997 View MSA. No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  0.246147507070597 bayes_pls_golite062009
    2 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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